Job Description P08200 Confidence 100.00% Date Thu Jan 5 11:00:54 GMT 2012 Rank 4 Aligned Residues 373 % Identity 53% Template c2e0cA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:409aa long hypothetical nadp-dependent isocitrate PDBTitle: crystal structure of isocitrate dehydrogenase from sulfolobus tokodaii2 strain7 at 2.0 a resolution Resolution 2.00 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	V	P	A	Q	G	K	K	I	T	L	Q	N	G	K	L	N	V	P	E	N	P	I	I	P	Y	I	E	G	D	G	I	G	V	D	V	T	P	A	M	L	K	V	V	D	A	A	V	E	K	A	Y	K	G	E	R	K	I	S	W	M	E	I	Y	T	G	E	K	S	T	Q	V	Y	G	Q	D	V	W	L
Query Conservation
Alig confidence																																																																														.	.
Template Conservation																																																																														.	.
Template Sequence		Y	K	E	P	E	D	G	E	K	I	K	F	D	K	G	K	W	I	V	P	N	K	P	V	I	L	Y	I	E	G	D	G	I	G	P	E	I	T	N	A	A	I	K	V	I	N	K	A	V	E	R	A	Y	G	S	S	R	E	I	K	W	L	E	V	Y	A	G	E	K	A	E	K	L	V	N	D	.	.	R	F
Template Known Secondary structure		S				T	T		B					S	S	S						S	S	B								S	T	T																					T	T	S											T								S		.	.	S	S
Template Predicted Secondary structure																																																																														.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.			.	80
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	E	T	L	D	L	I	R	E	Y	R	V	A	I	K	G	P	L	T	T	P	V	G	G	G	I	R	S	L	N	V	A	L	R	Q	E	L	D	L	Y	I	C	L	R	P	V	R	Y	Y	Q	G	T	P	S	P	V	K	H	P	E	L	T	D	M	V	I	F	R	E	N	S	E	D	I	Y	A	G	I	E
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.
Template Sequence		P	K	E	T	Q	E	M	L	L	K	Y	R	V	V	L	K	G	P	L	.	.	.	.	.	.	.	.	E	S	V	N	V	A	I	R	L	M	L	D	L	Y	A	N	I	R	P	V	K	Y	I	E	G	L	E	S	P	L	K	H	P	E	K	V	D	M	I	I	F	R	E	N	T	D	D	L	Y	R	G	I	E
Template Known Secondary structure																					.	.	.	.	.	.	.	.											T	T												T	T				S	S	S			T	T										S	S	G	G	G	G
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.									100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	K	A	D	S	A	D	A	E	K	V	I	K	F	L	R	E	E	M	G	V	K	K	I	R	F	P	E	H	C	G	I	G	I	K	P	C	S	E	E	G	T	K	R	L	V	R	A	A	I	E	Y	A	I	A	N	D	R	D	S	V	T	L	V	H	K	G	N	I	M	K	F	T	E	G	A	F	K	D	W
Query Conservation
Alig confidence																						.	.	.
Template Conservation																						.	.	.
Template Sequence		Y	P	F	N	S	E	E	A	K	K	I	R	D	F	L	R	K	E	L	K	.	.	.	V	E	I	E	D	D	T	G	I	G	I	K	V	M	S	K	Y	K	T	Q	R	I	T	R	L	A	I	Q	Y	A	I	E	H	K	R	K	K	V	T	I	M	H	K	G	N	V	M	K	Y	T	E	G	A	F	R	E	W
Template Known Secondary structure				T	T	S														S		.	.	.					S	S																											T	T										T	T	T	S	T	T	T
Template Predicted Secondary structure																						.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180				.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		245	.	.	.	.	250	.																			.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	Y	Q	L	A	R	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	F	G	G	E	L	I	D	G	G	P	W	L	K	V	K	N	P	N	T	G	K	E	I	V	I	K	D	V	I	A	D	A	F	L	Q	Q	I	L	L	R	P	A	E	Y	D	V	I	A	C	M	N	L	N	G
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	Y	E	V	A	L	K	E	Y	R	D	F	I	V	T	E	E	E	I	N	Q	G	K	P	D	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	I	I	L	N	D	R	I	A	D	N	M	F	Q	Q	I	I	I	R	P	E	E	Y	D	I	I	L	A	P	N	V	N	G
Template Known Secondary structure										S	T	T	T								T	T	T				T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S																			G	G	G		S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.																					.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Y	I	S	D	A	L	A	A	Q	V	G	G	I	G	I	A	P	G	A	N	I	G	D	E	C	A	L	F	E	A	T	H	G	T	A	P	K	Y	A	G	Q	D	K	V	N	P	G	S	I	I	L	S	A	E	M	M	L	R	H	M	G	W	T	E	A	A	D	L	I	V	K	G	M	E	G	A	I	N	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	Y	I	S	D	A	A	G	A	L	I	G	N	I	G	M	L	G	G	A	N	I	G	D	E	G	G	M	F	E	A	I	H	G	T	A	P	K	Y	A	G	K	N	V	A	N	P	T	G	I	I	K	A	G	E	L	M	L	R	W	M	G	W	N	E	A	A	D	L	I	E	K	A	I	N	M	A	I	R	D
Template Known Secondary structure											T	T	S		G	G	G								T	T							S	S				G	G	G	T	T	T	T		S		T															T																		T
Template Predicted Secondary structure
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.						.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.
Query SS confidence																			.	.	.	.	.
Query Sequence		K	T	V	T	Y	D	F	E	R	L	M	D	G	A	K	L	L	.	.	.	.	.	K	C	S	E	F	G	D	A	I	I	E	N	M
Query Conservation																			.	.	.	.	.
Alig confidence									.	.	.	.	.	.					.	.	.	.	.
Template Conservation									.	.	.	.	.	.
Template Sequence		K	K	V	T	Q	D	I	.	.	.	.	.	.	A	R	F	M	G	V	K	A	L	G	T	K	E	Y	A	D	E	L	I	K	I	M
Template Known Secondary structure		T							.	.	.	.	.	.					T	S
Template Predicted Secondary structure									.	.	.	.	.	.
Template SS confidence
		378	.	380	.	.	.	.							.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.