Job Description P08200 Confidence 72.67% Date Thu Jan 5 11:00:54 GMT 2012 Rank 35 Aligned Residues 271 % Identity 15% Template c2choA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:glucosaminidase; PDBTitle: bacteroides thetaiotaomicron hexosaminidase with o-2 glcnacase activity Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	G	K	K	I	T	L	Q	N	G	K	L	N	V	P	E	N	P	I	I	P	Y	I	E	G	D	G	I	G	V	D	V	T	P	A	M	L	K	V	V	D	A	A	V	E	K	A	Y	K	G	E	R	K	I	S	W	M	E	I	Y	T	G	E	K	S	T	Q	V	Y	G	Q	D	V	W	L	P	A	E	T
Query Conservation
Alig confidence																				.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	P	P	Q	Q	L	I	V	Q	N	K	T	I	D	L	P	A	V	.	.	Y	Q	L	N	G	G	E	E	A	N	P	H	A	V	K	V	L	K	E	L	L	.	.	.	.	.	.	.	.	.	.	.	.	G	M	L	I	S	I	G	E	K	G	D	K	S	V	R	K	Y	S	R	Q	I	P	D	H	K	E	G
Template Known Secondary structure		S			S													S	S	.	.					S	T	T	T	S													.	.	.	.	.	.	.	.	.	.	.	.									T	T	S	G	G	G	G	G	G	T	T	T	S		S	S	T	T
Template Predicted Secondary structure																				.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.													.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		89	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure				.																																									.	.
Query SS confidence				.																																									.	.
Query Sequence		L	D	.	L	I	R	E	Y	R	V	A	I	K	G	P	L	T	T	P	V	G	G	G	I	R	S	L	N	V	A	L	R	Q	E	L	D	L	Y	I	C	L	R	P	.	.	V	R	Y	Y	Q	G	T	P	S	P	V	K	H	P	E	L	T	D	M	V	I	F	R	E	N	S	E	D	I	Y	A	G	I	E	W
Query Conservation				.																																									.	.
Alig confidence				.															.	.	.	.																	.						.	.										.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation																			.	.	.	.																	.																	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Sequence		Y	Y	L	S	V	N	E	K	E	I	V	L	A	G	N	D	E	.	.	.	.	R	G	T	Y	Y	A	L	Q	T	F	A	Q	L	L	K	D	.	G	K	L	P	E	V	E	I	K	D	Y	P	S	V	R	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	V	V	E	G	F	Y	.	G	T	P	W
Template Known Secondary structure								S	S							S	S		.	.	.	.															B	T	.	T												S	S	S		.	.	.	.	.	.	.	.	.	.	.	.	.								S	.	S	S
Template Predicted Secondary structure																			.	.	.	.																	.																	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.					.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.														130	.	.	.	.	.	.	.		.	.	140	.
		166	.	.	.	170	.	.	.	.	.	.								.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.
Query Sequence		K	A	D	S	A	D	A	E	K	V	I	.	.	.	.	.	.	.	K	F	L	R	E	E	M	G	V	K	K	I	R	F	P	E	H	C	G	I	G	I	K	P	C	S	E	E	G	T	K	R	L	V	R	A	A	I	E	Y	A	I	A	N	D	R	D	S	V	T	L	V	H	K	G	N	I	M	K	F	T	E
Query Conservation													.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.																			.	.	.	.																		.
Template Conservation																																						.	.	.	.																		.
Template Sequence		S	H	Q	A	R	L	S	Q	L	K	F	Y	G	K	N	K	M	N	T	Y	I	Y	G	P	K	D	D	P	Y	H	S	A	P	N	W	R	.	.	.	.	L	P	Y	P	D	K	E	A	A	Q	L	Q	E	L	V	A	V	.	A	N	E	N	E	V	D	F	V	W	A	I	H	P	G	Q	D	I	K	W	N	K
Template Known Secondary structure																T	T									T	T		T	T	T	S	T	T	G	G	G	.	.	.	.	S																	.				T	T										T	T	T			S	S
Template Predicted Secondary structure																																						.	.	.	.																		.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.					.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.									.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.															.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.															.	.	.	.	.
Query Sequence		G	A	F	K	D	W	G	Y	Q	L	A	R	E	E	F	G	G	E	L	I	D	G	G	P	W	L	K	V	K	N	P	N	T	G	K	E	I	V	I	K	D	V	I	A	D	A	F	L	Q	Q	I	L	L	.	.	.	.	.	.	.	.	R	P	A	E	Y	D	V	I	A	C	M	N	L	N	.	.	.	.	.
Query Conservation																																																							.	.	.	.	.	.	.	.															.	.	.	.	.
Alig confidence																.													.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.															.	.	.	.	.
Template Conservation																.													.	.	.	.	.	.	.	.
Template Sequence		E	D	R	D	L	L	L	A	K	F	E	K	M	Y	.	Q	L	G	V	R	S	F	A	V	F	F	D	.	.	.	.	.	.	.	.	D	I	S	G	E	G	T	N	P	Q	K	Q	A	E	L	L	N	Y	I	D	E	K	F	A	Q	V	K	P	D	I	N	Q	L	V	M	C	P	T	E	Y	N	K	S	W	S
Template Known Secondary structure																.		T	T										.	.	.	.	.	.	.	.	S			S	G	G	G																T	T	T	T	S	S	S									S	S		S	G	G	G	S
Template Predicted Secondary structure																.													.	.	.	.	.	.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.									.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
					306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	G	D	Y	I	S	D	A	L	A	A	Q	V	G	G	I	G	I	A	P	G	A
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		N	P	N	G	N	Y	L	T	T	L	G	D	K	L	N	P	S	I	Q	I	M	W	T	G
Template Known Secondary structure			T	T	S	S									S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions