Job Description P08200 Confidence 96.25% Date Thu Jan 5 11:00:54 GMT 2012 Rank 33 Aligned Residues 183 % Identity 16% Template c2b0tA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadp isocitrate dehydrogenase; PDBTitle: structure of monomeric nadp isocitrate dehydrogenase Resolution 1.75 Å

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		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	I	K	P	C	S	E	E	G	T	K	R	L	V	R	A	A	I	E	Y	A	I	A	N	D	R	D	S	V	T	L	V	H	K	G	N	I	M	K	F	T	E	G	A	F	K	D	W	G	Y	Q	L	A	R	E	E	F	G	G	E	L	I	D	G	G	P	W	L	K	V	K	N	P	N	T	G	K	E	I
Query Conservation
Alig confidence																																						.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	R	A	C	Q	V	K	D	A	P	I	Q	D	W	V	K	L	A	V	T	R	S	R	L	S	G	M	P	A	V	F	W	L	D	P	E	.	.	.	R	A	H	D	R	N	L	A	S	L	V	E	K	Y	L	A	D	H	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	L
Template Known Secondary structure																																				T	T	.	.	.																T	T	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																																						.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		452	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.				.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.																			.	.	510
		276	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.		.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.						.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.
Predicted Secondary structure						.																			.																				.	.	.	.	.																						.									.	.
Query SS confidence						.																			.																				.	.	.	.	.																						.									.	.
Query Sequence		V	I	K	D	.	V	I	A	D	A	F	L	Q	Q	I	L	L	R	P	A	E	Y	D	.	V	I	A	C	M	N	L	N	G	D	Y	I	S	D	A	L	A	A	Q	.	.	.	.	.	V	G	G	I	G	I	A	P	G	A	N	I	G	D	E	C	A	L	F	E	A	.	T	H	G	T	A	P	K	Y	.	.
Query Conservation						.																			.																				.	.	.	.	.																						.									.	.
Alig confidence						.																			.																				.	.	.	.	.												.	.	.								.									.	.
Template Conservation																																																													.	.	.
Template Sequence		D	I	Q	I	L	S	P	V	E	A	T	Q	L	S	I	D	R	I	R	R	G	E	D	T	I	S	V	T	G	N	V	L	R	D	Y	N	T	D	L	F	P	I	L	E	L	G	T	S	A	K	M	L	S	V	V	P	L	M	A	.	.	.	G	G	G	L	F	E	T	G	A	G	G	S	A	P	K	H	V	Q
Template Known Secondary structure																					T	T																									S		S	S	S							B	T	T	.	.	.	S								S	S
Template Predicted Secondary structure																																																													.	.	.
Template SS confidence
		511	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.				570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.
						346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.								.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure		.	.	.	.																											.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																											.	.	.	.	.	.	.
Query Sequence		.	.	.	.	A	G	Q	D	K	V	N	P	G	S	I	I	L	S	A	E	M	M	L	R	H	M	G	W	T	E	.	.	.	.	.	.	.	A	A	D	L	I	V	K	G	M	E	G	A	I	N	A	K	T	V	T	Y	D	F	E	R	L	M	D	G	A	K	L
Query Conservation		.	.	.	.																											.	.	.	.	.	.	.
Alig confidence		.	.	.	.																											.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	V	Q	E	E	N	H	L	R	W	D	S	L	G	E	F	L	A	L	A	E	S	F	R	H	E	L	N	N	N	G	N	T	K	A	G	V	L	A	D	A	L	D	K	A	T	E	K	L	L	N	E	E	K	S	P	S	R	K	V	G	E	I	D	N	R	G	S
Template Known Secondary structure							S																																														T	T		S			S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		588	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions