Return to main results Retrieve Phyre Job Id

Job DescriptionQ46786
Confidence1.85%DateThu Jan 5 12:34:07 GMT 2012
Rank68Aligned Residues25
% Identity52%Templatec3g8qA_
PDB info PDB header:rna binding proteinChain: A: PDB Molecule:predicted rna-binding protein, contains thump PDBTitle: a cytidine deaminase edits c-to-u in transfer rnas in2 archaea
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   101........110........ .120.....
Predicted Secondary structure 




.

Query SS confidence 

















.






Query Sequence  LTKIENNVDLNKFTTICT. DVLSPRV
Query Conservation 

















.






Alig confidence 

















.






Template Conservation 

























Template Sequence  LTSVGREVNLNDPRTVVTVDVLGPRV
Template Known Secondary structure  TTT

B
SSS
STT
Template Predicted Secondary structure 












Template SS confidence 

























   246...250.........260.........270.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions