Job Description Q46786 Confidence 1.93% Date Thu Jan 5 12:34:07 GMT 2012 Rank 60 Aligned Residues 43 % Identity 44% Template c2ogfD_ PDB info PDB header:structural genomics, unknown function Chain: D: PDB Molecule:hypothetical protein mj0408; PDBTitle: crystal structure of protein mj0408 from methanococcus jannaschii,2 pfam duf372 Resolution 1.89 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	N	S	L	P	L	Q	P	L	V	P	D	Q	E	N	K	N	K	K	N	E	E	K	S	V	N	P	V	K	I	T	M	G	S	G	L	N	Y	I	E	Q	E	S	L	G	G	K	Y	L	T	H	D	L	S	I	K	I	A	D
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	E	E	A	X	K	N	Q	P	C	V	Y	D	I	K	V	K	I	R	N	V	G	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	V	S	L	D	G	K	X	L	D	V	D	L	K	I	K	I	N	K
Template Known Secondary structure								T	S	T	T										S			S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						G	G	G										T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.																		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions