Return to main results Retrieve Phyre Job Id

Job DescriptionQ46786
Confidence1.56%DateThu Jan 5 12:34:07 GMT 2012
Rank92Aligned Residues68
% Identity10%Templatec2kj9A_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:integrase; PDBTitle: nmr structure of intb phage-integrase-like protein fragment2 90-199 from erwinia carotova subsp. atroseptica: northeast3 structural genomics consortium target ewr217e
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   60.........70.........80.........90.........100.........110.........120........
Predicted Secondary structure 






Query SS confidence 




































































Query Sequence  SIKIADISEEIIQQAILSAMSIYKFSITDDLMSMAVNELIKLTKIENNVDLNKFTTICTDVLSPRVTRH
Query Conservation 




































































Alig confidence 

































.

































Template Conservation     
  

   
      
       
       .
  
   

  
 
  

   

    
 
    
Template Sequence  NKDIAELDTGDLLVPIKKIEKLGYLEIAMRVKQY. ATAIMRYAVQQKMIRFNPAYDLEGAVQKLEHHHH
Template Known Secondary structure  GSBGGG

TTT
.TTSSSS


S
SSSSSS
SS
Template Predicted Secondary structure 






.















Template SS confidence 




































































   4950.........60.........70.........80.. .......90.........100.........110......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions