Job Description P42604 Confidence 67.18% Date Thu Jan 5 12:01:48 GMT 2012 Rank 12 Aligned Residues 73 % Identity 21% Template c3m7oB_ PDB info PDB header:immune system Chain: B: PDB Molecule:lymphocyte antigen 86; PDBTitle: crystal structure of mouse md-1 in complex with phosphatidylcholine Resolution 1.65 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		D	L	A	E	G	T	E	V	S	V	D	N	Q	T	V	T	L	R	Q	D	V	A	R	G	H	K	F	A	L	T	D	I	A	K	G	A	N	V	I	K	Y	G	L	P	I	G	Y	A	L	A	D	I	A	A	G	V	H	V	H	A	H	N	T	R	T	N	L	S	.	D	L	D	Q	Y	R	Y
Query Conservation																																																																						.
Alig confidence													.													.																																												.
Template Conservation													.													.
Template Sequence		S	K	Q	I	Q	S	N	L	N	I	R	.	F	G	I	I	L	R	Q	D	I	R	K	L	.	F	L	D	I	T	L	M	A	K	G	S	S	I	L	N	Y	S	Y	P	L	C	F	S	F	C	G	R	R	K	G	E	Q	I	Y	Y	A	G	P	V	N	N	P	G	L	D	V	P	Q	G	E	Y
Template Known Secondary structure			S				S	S					.						S	S			S	S		.									T	T													T	T	T	T			T	T																		S
Template Predicted Secondary structure													.													.
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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