Job Description P42604 Confidence 17.52% Date Thu Jan 5 12:01:48 GMT 2012 Rank 72 Aligned Residues 120 % Identity 14% Template c3hlyA_ PDB info PDB header:flavoprotein Chain: A: PDB Molecule:flavodoxin-like domain; PDBTitle: crystal structure of the flavodoxin-like domain from2 synechococcus sp q5mzp6_synp6 protein. northeast structural3 genomics consortium target snr135d. Resolution 2.40 Å

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		124	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.																		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure									.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	W	I	L	P	T	V	.	.	G	C	V	N	G	I	A	R	Q	I	Q	N	R	F	L	K	E	T	N	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	T	D	G	V	F	L	F	S	H	T	Y	G	C	S	Q	L	G	D	D	H	I	N	T	R	T	M	L	Q	N	M	V
Query Conservation									.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.																	.
Template Conservation																																																														.	.	.																	.
Template Sequence		V	L	I	G	Y	L	S	D	Y	G	Y	S	D	R	L	S	Q	A	I	G	R	G	L	V	K	T	G	V	A	V	E	X	V	D	L	R	A	V	D	P	Q	E	L	I	E	A	V	S	S	A	R	G	I	V	L	G	T	P	P	S	.	.	.	Q	P	S	E	A	V	A	T	A	L	S	T	I	F	A	A	.
Template Known Secondary structure								T	T	S	T	T															T	T								T	T	T														S								B	S	.	.	.	S																.
Template Predicted Secondary structure																																																														.	.	.																	.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.				.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.			230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																																					.											.	.
Query SS confidence																																					.											.	.
Query Sequence		R	H	P	N	A	G	A	V	L	V	I	G	L	G	C	E	N	N	Q	V	A	A	F	R	E	T	L	G	D	I	D	P	E	R	V	.	H	F	M	I	C	Q	Q	Q	D	D	.	.	E	I	E	A	G	I	E	H	L	H	Q	L	Y	N	V	M	R	N
Query Conservation																																					.											.	.
Alig confidence																																					.											.	.
Template Conservation
Template Sequence		A	H	N	K	Q	A	I	G	L	F	D	S	Y	G	G	D	D	E	P	I	D	A	L	L	A	Q	F	R	N	L	G	L	H	T	A	F	P	P	I	R	V	K	D	Q	P	T	E	A	I	Y	Q	Q	C	E	E	S	G	T	D	L	G	Q	W	L	T	R
Template Known Secondary structure				T	T	S										S	S	B													T	T				S	S	S		B				S	S
Template Predicted Secondary structure
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions