Job Description P42604 Confidence 39.95% Date Thu Jan 5 12:01:48 GMT 2012 Rank 26 Aligned Residues 152 % Identity 13% Template c1ychD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:nitric oxide reductase; PDBTitle: x-ray crystal structures of moorella thermoacetica fpra.2 novel diiron site structure and mechanistic insights into3 a scavenging nitric oxide reductase Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.																		.	150	.	.	.	.	.
Predicted Secondary structure																						.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	D	F	Q	D	L	P	A	Q	A	A	D	R	E	V	Q	I	Y	R	R	.	A	N	G	D	V	G	V	R	N	E	L	W	I	L	P	T	V	G	C	V	N	G	I	A	R	Q	I	Q	N	R	F	L	K	E	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	N	A	E	G	T	D
Query Conservation																						.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	S	H	G	I	I	W	R	K	D	P	G	R	I	I	E	A	Y	A	R	W	A	E	G	Q	G	K	A	K	A	V	I	A	Y	D	T	M	W	L	S	T	E	K	M	A	H	A	L	M	D	G	L	V	A	G	G	C	E	V	K	L	F	K	L	S	V	S	D	R	N	D	V	I	K	E	I	L	D	A	R
Template Known Secondary structure			S	S	S		B	B		S															T				S									S	S	S																T	T								G	G	G	S													S
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.					230	.
Predicted Secondary structure																																																																												.	.	.	.
Query SS confidence																																																																												.	.	.	.
Query Sequence		G	V	F	L	F	S	H	T	Y	G	C	S	Q	L	G	D	D	H	I	N	T	R	T	M	L	Q	N	M	V	R	H	P	N	A	G	A	V	L	V	I	G	L	G	C	E	N	N	Q	V	A	A	F	R	E	T	L	G	D	I	D	P	E	R	V	H	F	M	I	C	Q	Q	Q	D	D	.	.	.	.	E	I
Query Conservation																																																																												.	.	.	.
Alig confidence												.																			.																																													.	.	.	.
Template Conservation												.																			.
Template Sequence		A	V	L	V	G	S	P	T	I	N	.	N	D	I	L	P	V	V	S	P	L	L	D	D	L	V	G	L	R	.	P	K	N	K	V	G	L	A	F	G	A	Y	G	W	G	G	G	A	Q	K	I	L	E	E	R	L	K	A	A	K	I	E	L	I	A	E	P	G	P	T	V	Q	W	V	P	R	G	E	D	L
Template Known Secondary structure										B	T	.	T	B			G	G	G												.		S	S										S	S	S														T	T				S	S	S	S						S	S
Template Predicted Secondary structure												.																			.
Template SS confidence
		306	.	.	.	310	.	.	.	.	.		.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.		.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	G	I	E	H	L	H	Q	L	Y	N	V	M	R	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	R	C	Y	E	L	G	R	K	I	A	A	R	I	A	D
Template Known Secondary structure															S
Template Predicted Secondary structure
Template SS confidence
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions