Job Description P42604 Confidence 34.31% Date Thu Jan 5 12:01:48 GMT 2012 Rank 30 Aligned Residues 120 % Identity 13% Template c1vmeB_ PDB info PDB header:electron transport Chain: B: PDB Molecule:flavoprotein; PDBTitle: crystal structure of flavoprotein (tm0755) from thermotoga maritima at2 1.80 a resolution Resolution 1.80 Å

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		122	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.																					.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	E	L	W	I	L	P	T	V	G	C	V	N	G	.	.	I	A	R	Q	I	Q	N	R	F	L	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	N	N	A	E	G	T	D	G	V	F	L	F	S	H	T	Y	G	C	S	Q	L	G	D	D	H	I	N	T	R	T	M
Query Conservation																.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation																																																																				.
Template Sequence		G	K	V	T	V	I	Y	D	S	X	Y	G	F	V	E	N	V	X	K	K	A	I	D	S	L	K	E	K	G	F	T	P	V	V	Y	K	F	S	D	E	E	R	P	A	I	S	E	I	L	K	D	I	P	D	S	E	A	L	I	F	G	V	S	T	Y	E	.	A	E	I	H	P	L	X	R	F	T	L	L	E
Template Known Secondary structure		T									S	S	S																T	T										S	S												S	T	T		S										T	.	T
Template Predicted Secondary structure																																																																				.
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.		320	.	.	.	.	.	.	.	.	.	330	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.				230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																																																				.	.	.
Query SS confidence																																																				.	.	.
Query Sequence		L	Q	N	M	V	R	H	P	N	A	G	A	V	L	V	I	G	L	G	C	E	N	N	Q	V	A	A	F	R	E	T	L	G	D	I	D	P	E	R	V	H	F	M	I	C	Q	Q	Q	D	D	.	.	.	E	I	E	A	G	I	E	H	L	H	Q	L	Y	N
Query Conservation																																																				.	.	.
Alig confidence								.																																												.	.	.
Template Conservation								.
Template Sequence		I	I	D	K	A	N	.	Y	E	K	P	V	L	V	F	G	V	H	G	W	A	P	S	A	E	R	T	A	G	E	L	L	K	E	T	K	F	R	I	L	S	F	T	E	I	K	G	S	N	X	D	E	R	K	I	E	E	A	I	S	L	L	K	K	E	L	E
Template Known Secondary structure								.																T	T	S									T	S	S											S	S	S			T
Template Predicted Secondary structure								.
Template SS confidence
		333	.	.	.	.	.		.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions