Return to main results Retrieve Phyre Job Id

Job DescriptionP42604
Confidence29.43%DateThu Jan 5 12:01:48 GMT 2012
Rank39Aligned Residues68
% Identity22%Templatec1g7tA_
PDB info PDB header:translationChain: A: PDB Molecule:translation initiation factor if2/eif5b; PDBTitle: x-ray structure of translation initiation factor if2/eif5b2 complexed with gdpnp
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   346...350.........360.........370.........380 .........390..... ....400........
Predicted Secondary structure 











................









.

Query SS confidence 


































. . . . . . . . . . . . . . . .














.












Query Sequence  GNKAGGITTLEDKSLGCTQKAGSSVVVDVLRYGER. . . . . . . . . . . . . . . . LKTPGLNLLSAPGND. AVATSALAGAGCH
Query Conservation 

  












  
 

 

  

 
 
 ................    

 





 
. 

 




 

 
Alig confidence 


































................














.












Template Conservation 



 






 
    






 


            
              








  
     

   

Template Sequence  GHVDHGKTTLLDHIRGSAVASRITQHIGATEIPMDVIEGICGDFLKKFSIRETLPGLFFIDTPGHEAFTTLRKRGGALAD
Template Known Secondary structure  STTSSTT


TTS
GGGTT
GGGGT



TTT
GGGSTTS
S
Template Predicted Secondary structure 





































Template SS confidence 















































































   12.......20.........30.........40.........50.........60.........70.........80.........90.
 
   409410...
Predicted Secondary structure 
Query SS confidence 




Query Sequence  MVLFS
Query Conservation 

 

Alig confidence 




Template Conservation   



Template Sequence  LAILI
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 




   96...100
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions