Job Description Q46938 Confidence 96.71% Date Thu Jan 5 12:35:57 GMT 2012 Rank 31 Aligned Residues 79 % Identity 20% Template d2arca_ SCOP info Double-stranded beta-helix Regulatory protein AraC Regulatory protein AraC Resolution 1.50

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.						.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																																									.	.	.	.	.
Query SS confidence																																									.	.	.	.	.
Query Sequence		Y	S	H	I	D	R	I	I	V	G	G	I	M	P	I	T	K	T	V	S	V	G	G	E	V	G	K	Q	L	G	V	S	Y	F	L	E	R	R	E	.	.	.	.	.	L	G	V	I	N	I	G	G	A	G	T	I	T	V	D	G	Q	C	Y	E	I	G	H	R	D	A	L	Y	V	G	K	G	A	K	E	V
Query Conservation																																									.	.	.	.	.
Alig confidence										.													.	.	.	.	.	.	.	.	.	.									.	.	.	.	.																																		.
Template Conservation										.													.	.	.	.	.	.	.	.	.	.																																															.
Template Sequence		Y	S	F	N	A	H	L	V	.	A	G	L	T	P	I	E	A	N	G	Y	L	.	.	.	.	.	.	.	.	.	.	D	F	F	I	D	R	P	L	G	M	K	G	Y	I	L	N	L	T	I	R	G	Q	G	V	V	K	N	Q	G	R	E	F	V	C	R	P	G	D	I	L	L	F	P	P	G	E	.	I	H
Template Known Secondary structure					S	S	S			.								T	T	S	T	T	.	.	.	.	.	.	.	.	.	.		S					T	T			S	S																T	T							T	T							T	T		.
Template Predicted Secondary structure										.													.	.	.	.	.	.	.	.	.	.																																															.
Template SS confidence
		13	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.											.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	A	S	I	D	T	G	T	P	A	K	F	Y	Y	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	Y	G	R	H	P	E	A	R	E	W	Y	H	Q	W	V
Template Known Secondary structure							T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions