Job Description Q46938 Confidence 98.92% Date Thu Jan 5 12:35:57 GMT 2012 Rank 5 Aligned Residues 192 % Identity 13% Template d1sq4a_ SCOP info Double-stranded beta-helix RmlC-like cupins YlbA-like Resolution 2.70

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		50	.	.	.	.	.									.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure								.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.
Query Sequence		I	M	P	I	T	K	.	.	.	.	.	.	.	.	T	V	S	V	G	G	E	V	G	K	Q	L	G	V	S	Y	F	L	E	R	R	E	L	G	V	I	N	I	G	G	A	G	T	I	T	V	D	G	Q	C	Y	E	I	G	H	R	D	A	L	Y	V	G	K	G	A	K	E	V	V	F	A	S	I	D	T	G
Query Conservation								.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.					.	.																																																						.	.
Template Conservation																				.	.																																																						.	.
Template Sequence		A	R	P	L	S	G	F	A	E	T	F	S	Q	Y	I	V	E	L	.	.	A	P	N	G	G	S	D	K	P	E	Q	D	P	N	A	E	A	V	L	F	V	V	E	G	E	L	S	L	T	L	Q	G	Q	V	H	A	X	Q	P	G	G	Y	A	F	I	P	P	G	A	D	Y	K	V	.	.	R	N	T	T	G
Template Known Secondary structure					S	S	S	S			S									.	.							S	S					T	T										S							S	S							T	T							T	T						.	.				S	S
Template Predicted Secondary structure																				.	.																																																						.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.
		122	.	.	.	.	.	.	.				130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure										.	.	.							.	.
Query SS confidence										.	.	.							.	.
Query Sequence		T	P	A	K	F	Y	Y	N	.	.	.	C	A	P	A	H	T	.	.	T	Y	P	T	K	K	V	T	P	D	E	V	S	P	V	T	L	G	D	N	L	T	S	N	R	R	T	I	N	K	Y	F	V	P	D	V	L	E	T	C	Q	L	S	M	G	L	T	E	L	A	P	G	N	L	W	N	T	M	P	C	H
Query Conservation										.	.	.							.	.
Alig confidence										.	.	.							.	.																													.	.	.																							.	.	.
Template Conservation																																																	.	.	.																							.	.	.
Template Sequence		Q	H	T	R	F	H	W	I	R	K	H	Y	Q	K	V	D	G	V	P	L	P	E	A	F	V	T	N	E	Q	D	I	Q	P	L	V	X	P	D	T	E	G	R	W	S	T	T	R	.	.	.	F	V	D	X	S	D	X	R	H	D	X	H	V	N	I	V	N	F	E	P	G	G	.	.	.	V	I	P	F	A
Template Known Secondary structure		S															T	T											G	G	G	S						S	S	G	G	G							.	.	.	S	S		T	T		T	T		S										S	S	S	.	.	.			S
Template Predicted Secondary structure																																																	.	.	.																							.	.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180				.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.				.	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	H	E	R	R	M	E	V	Y	F	Y	F	N	M	D	D	D	A	C	V	F	H	M	M	G	Q	P	Q	E	T	R	H	I	V	M	H	N	E	Q	A	V	I	S	P	S	W	S	I	H	S	G	V	G	T	K	A	Y	T	F	I	W	G	M
Query Conservation
Alig confidence												.	.	.															.	.	.	.	.
Template Conservation												.	.	.															.	.	.	.	.
Template Sequence		E	T	H	V	X	E	H	G	L	Y	.	.	.	V	L	E	G	K	A	V	Y	R	L	N	Q	D	W	.	.	.	.	.	V	E	V	E	A	G	D	F	X	W	L	R	A	F	C	P	Q	A	C	Y	S	G	G	P	G	R	F	R	Y	L	L
Template Known Secondary structure					S							.	.	.											T	T			.	.	.	.	.					T	T								S									S	S	S
Template Predicted Secondary structure												.	.	.															.	.	.	.	.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.				.	.	220	.	.	.	.	.	.	.	.	.	230	.						.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions