Job Description Q46938 Confidence 98.87% Date Thu Jan 5 12:35:57 GMT 2012 Rank 6 Aligned Residues 172 % Identity 17% Template d1rc6a_ SCOP info Double-stranded beta-helix RmlC-like cupins YlbA-like Resolution 2.60

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.				130	.	.	.
Predicted Secondary structure																																																																											.	.	.
Query SS confidence																																																																											.	.	.
Query Sequence		V	S	V	G	G	E	V	G	K	Q	L	G	V	S	Y	F	L	E	R	R	E	L	G	V	I	N	I	G	G	A	G	T	I	T	V	D	G	Q	C	Y	E	I	G	H	R	D	A	L	Y	V	G	K	G	A	K	E	V	V	F	A	S	I	D	T	G	T	P	A	K	F	Y	Y	N	.	.	.	C	A	P	A
Query Conservation																																																																											.	.	.
Alig confidence					.	.																																																						.	.														.	.	.
Template Conservation					.	.																																																						.	.
Template Sequence		V	T	L	.	.	H	Q	N	G	G	N	Q	Q	G	F	G	G	E	G	I	E	T	F	L	Y	V	I	S	G	N	I	T	A	K	A	E	G	K	T	F	A	L	S	E	G	G	Y	L	Y	C	P	P	G	S	L	M	T	F	.	.	V	N	A	Q	A	E	D	S	Q	I	F	L	Y	K	R	R	Y	V	P	V
Template Known Secondary structure					.	.							S	S		S			T	T										S							T	T							T	T							T	T						.	.				S	S	S
Template Predicted Secondary structure					.	.																																																						.	.
Template SS confidence
		1064	.	.			.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.			1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		H	T	T	Y	P	T	K	K	V	T	P	D	E	V	S	P	V	T	L	G	D	N	L	T	S	N	R	R	T	I	N	K	Y	F	V	P	D	V	L	E	T	C	Q	L	S	M	G	L	T	E	L	A	P	G	N	L	W	N	T	M	P	.	C	H	T	H	E	R	R	M	E	V	Y	F	Y	F	N	M	D	D
Query Conservation																																																															.
Alig confidence																		.	.	.	.	.	.	.	.	.								.						.																	.	.	.				.						.	.							.	.
Template Conservation																		.	.	.	.	.	.	.	.	.								.						.																	.	.	.										.	.							.	.
Template Sequence		E	G	Y	A	P	W	L	V	S	G	N	A	S	E	L	E	.	.	.	.	.	.	.	.	.	R	I	V	I	L	L	D	.	F	L	P	K	E	.	L	G	F	D	M	N	M	H	I	L	S	F	A	P	G	A	.	.	.	S	H	G	Y	I	E	T	H	V	.	.	Q	E	H	G	A	Y	.	.	I	L	S
Template Known Secondary structure		T	T										G	G	G	S		.	.	.	.	.	.	.	.	.								.		S			S	.	T	T		S										T	T		.	.	.									S	.	.	S						.	.
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.								.						.																	.	.	.										.	.							.	.
Template SS confidence
		1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.										.	.	.	.	1160	.	.		.	.	.	.	.		.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.				.	.	.	.	.	.	1190	.	.			.	.	.	.	.	.			.	1200	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	C	V	F	H	M	M	G	Q	P	Q	E	T	R	H	I	V	M	H	N	E	Q	A	V	I	S	P	S	W	S	I	H	S	G	V	G	T	K	A	Y	T	F	I
Query Conservation
Alig confidence													.	.	.	.	.																								.
Template Conservation													.	.	.	.	.																								.
Template Sequence		G	Q	G	V	Y	N	L	D	N	N	W	.	.	.	.	.	I	P	V	K	K	G	D	Y	I	F	M	G	A	Y	S	L	Q	A	G	Y	G	V	A	.	F	S	Y	I
Template Known Secondary structure		S						S	S	S			.	.	.	.	.					T	T							S	S										.
Template Predicted Secondary structure													.	.	.	.	.																								.
Template SS confidence
		1209	1210	.	.	.	.	.	.	.	.	.						1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.		.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions