Job Description Q46938 Confidence 97.27% Date Thu Jan 5 12:35:57 GMT 2012 Rank 22 Aligned Residues 182 % Identity 15% Template d1j58a_ SCOP info Double-stranded beta-helix RmlC-like cupins Germin/Seed storage 7S protein Resolution 1.75

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		80	.	.	.	.	.	.	.	.	.	90	.		.	.	.					.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure														.				.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.				.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	I	N	I	G	G	A	G	T	I	T	V	.	D	G	Q	.	.	.	.	C	Y	E	I	G	H	R	D	A	L	Y	V	G	K	G	A	K	E	V	V	F	A	S	I	D	T	G	T	P	A	K	F	Y	Y	N	C	A	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation														.				.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.				.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	Y	X	I	Y	G	S	A	R	V	T	I	V	D	E	K	G	R	S	F	I	D	D	V	G	E	G	D	L	W	Y	F	P	S	G	L	P	H	S	I	Q	A	L	E	E	G	A	E	F	L	L	V	F	D	D	G	S	F	S	E	N	S	T	F	Q	L	T	D	W	L	A	H	T	P	K	E	V	I	A	A
Template Known Secondary structure																T	T	S									T	T							T	T																			S		T	T			G	G	G										T	S
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
																						134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160														.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	T	T	Y	P	T	K	K	V	T	P	D	E	V	S	P	V	T	L	G	D	N	L	T	S	N	R	.	.	.	.	.	.	.	.	.	.	.	.	.	R	T	I	N	K	Y	F	V	P	D	V	L	E	T	C	Q	L	S	M	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.
Template Sequence		N	F	G	V	T	K	E	E	I	S	N	L	P	G	K	E	K	Y	I	F	E	N	Q	L	P	G	S	L	.	.	K	D	D	I	V	E	G	P	N	G	E	V	P	Y	P	F	T	Y	R	L	L	E	Q	E	P	I	E	S	E	G	G	K	V	Y	I	A	D	S	T	N	F	K	V	S	K	T	I	A	S	A
Template Known Secondary structure				T			T	G	G	G	T	T	S		S	S			S											.	.								T	T				S	S		S				G	G	G	S						S	S							S	T	T	T	S	T	T			S
Template Predicted Secondary structure																														.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210			.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	E	L	A	P	G	N	L	W	N	T	M	P	C	H	T	H	E	R	R	M	E	V	Y	F	Y	F	N	M	D	D	D	A	C	V	F	H	M	M	G	Q	P	Q	E	T	R	H	I	V	M	H	N	E	Q	A	V	I	S	P	S	W	S	I	H	S	G	V	G	T	K	A	Y	T	F	I	W	G	M	V
Query Conservation
Alig confidence										.	.	.																			.	.	.
Template Conservation										.	.	.																			.	.	.
Template Sequence		L	V	T	V	E	P	G	A	.	.	.	X	R	E	L	H	W	H	P	N	T	H	E	W	Q	Y	Y	I	S	.	.	.	G	K	A	R	X	T	V	F	A	S	D	G	H	A	R	T	F	N	Y	Q	A	G	D	V	G	Y	V	P	F	A	X	G	H	Y	V	E	N	I	G	D	E	P	L	V	F	L	E	I
Template Known Secondary structure							T	T		.	.	.								S	S	S									.	.	.	S										T	T									S	S							T	T		B							S	S	S
Template Predicted Secondary structure										.	.	.																			.	.	.
Template SS confidence
		261	.	.	.	.	.	.	.				.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.				.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		261	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	N	Q	V	F	D	D	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	K	D	D	H	Y	A	D	V
Template Known Secondary structure			S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		335	.	.	.	.	340	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions