Job Description Q46938 Confidence 88.12% Date Thu Jan 5 12:35:57 GMT 2012 Rank 63 Aligned Residues 176 % Identity 14% Template c3s7eB_ PDB info PDB header:allergen Chain: B: PDB Molecule:allergen ara h 1, clone p41b; PDBTitle: crystal structure of ara h 1 Resolution 2.71 Å

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		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.			.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.			.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.			.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	L	G	V	I	N	I	G	G	A	G	T	I	T	V	.	.	D	G	.	.	Q	C	Y	E	I	G	H	R	D	A	L	Y	V	G	K	G	A	K	E	V	V	F	A	S	I	D	T	G	T	P	A	K	F	Y	Y	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																	.	.			.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.			.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	N	I	L	V	I	Q	Q	G	Q	A	T	V	T	V	A	N	G	N	N	R	K	S	F	N	L	D	E	G	H	A	L	R	I	P	S	G	F	I	S	Y	I	L	N	R	H	D	N	Q	N	L	R	V	A	K	I	S	M	P	V	N	T	P	G	Q	F	E	D	F	F	P	A	S	S	R	D	Q	S	S	Y
Template Known Secondary structure									S	B									S	S									T	T							T	T										S	S	S		B									S	S	B	T	T	B						S	S			S	S				T
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
																							130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.																				.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	A	P	A	H	T	T	Y	P	T	K	K	V	T	P	D	E	V	S	P	V	T	L	G	D	N	L	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	R	R	T	I	N	K	Y	F	V	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	Q	G	F	S	R	N	T	L	E	A	A	F	N	A	E	F	N	E	I	R	R	V	L	L	E	N	E	G	V	I	V	K	V	S	K	E	H	V	E	E	L	T	K	H	A	K	S	G	D	I	T	N	P	I	N	L	R	E	G	E	P	D	L	S	N	N	F	G	K	L	F	E	V	K	P	D	K	K	N
Template Known Secondary structure		T	T	T	S										T	S									T	T				S	S															T												T	T		S			S			S	S	S								S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230				.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.
Query SS confidence																																																															.	.	.
Query Sequence		D	V	L	E	T	C	Q	L	S	M	G	L	T	E	L	A	P	G	N	L	W	N	T	M	P	C	H	T	H	E	R	R	M	E	V	Y	F	Y	F	N	M	D	D	D	A	C	V	F	H	M	M	G	Q	P	Q	E	T	R	H	I	V	.	.	.	M	H	N	E	Q	A	V	I	S	P	S	W	S	I	H	S
Query Conservation																																																															.	.	.
Alig confidence																					.	.	.																	.	.																						.	.	.
Template Conservation																					.	.	.																	.	.
Template Sequence		P	Q	L	Q	D	L	D	M	M	L	T	C	V	E	I	K	E	G	A	.	.	.	L	M	L	P	H	F	N	S	K	A	M	V	I	V	V	V	.	.	N	K	G	T	G	N	L	E	L	V	A	V	R	S	N	R	E	V	R	R	Y	T	A	R	L	K	E	G	D	V	F	I	M	P	A	A	H	P	V	A
Template Known Secondary structure								T										T	T		.	.	.								S	S								.	.																											T	T							T	T
Template Predicted Secondary structure																					.	.	.																	.	.
Template SS confidence
		424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.				.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.			.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.
		247	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	G	T	K	A	Y	T	F	I	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	N	A	S	S	E	L	H	L	L	G
Template Known Secondary structure					S	S
Template Predicted Secondary structure
Template SS confidence
		520	.	.	.	.	.	.	.	.	.	530

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions