Job Description Q46938 Confidence 98.26% Date Thu Jan 5 12:35:57 GMT 2012 Rank 11 Aligned Residues 150 % Identity 13% Template c3rnsA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:cupin 2 conserved barrel domain protein; PDBTitle: cupin 2 conserved barrel domain protein from leptotrichia buccalis Resolution 2.07 Å

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		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	G	V	I	N	I	G	G	A	G	T	I	T	V	D	G	Q	C	Y	E	I	G	H	R	D	A	L	Y	V	G	K	G	A	K	E	V	V	F	A	S	I	D	T	G	T	P	A	K	F	Y	Y	N	C	A	P	A	H	T	T	Y	P	T	K	K	V	T	P	D	E	V	S	P	V	T	L	G	D	N	L
Query Conservation
Alig confidence																																															.	.											.	.	.	.	.	.	.	.															.
Template Conservation																																															.	.											.	.	.	.	.	.	.	.															.
Template Sequence		N	R	Y	Y	Y	C	F	N	G	N	G	E	I	F	I	E	N	N	K	K	T	I	S	N	G	D	F	L	E	I	T	A	N	H	N	Y	S	I	E	A	R	D	N	L	K	.	.	L	I	E	I	G	E	K	I	S	A	.	.	.	.	.	.	.	.	F	N	L	A	E	V	V	E	Y	Q	E	G	K	I	.
Template Known Secondary structure										S							S	S							T	T							S	S								S	S	S			.	.											.	.	.	.	.	.	.	.			S	G	G	G	S				T	T			.
Template Predicted Secondary structure																																															.	.											.	.	.	.	.	.	.	.															.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.			100	.	.	.	.	.	.	.	.	.									110	.	.	.	.	.	.	.	.	.	120	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	N	R	R	T	I	N	K	Y	F	V	P	D	V	L	E	T	C	Q	L	S	M	G	L	T	E	L	A	P	G	N	L	W	N	T	M	P	C	H	T	H	E	R	R	M	E	V	Y	F	Y	F	N	M	D	D	D	A	C	V	F	H	M	M	G	Q	P	Q	E	T	R	H	I	V	M	H	N	E	Q	A
Query Conservation
Alig confidence		.	.						.	.	.	.	.	.	.	.																		.	.	.										.	.						.	.															.	.	.	.	.
Template Conservation		.	.						.	.	.	.	.	.	.	.																		.	.	.										.	.						.	.															.	.	.	.	.
Template Sequence		.	.	V	S	K	N	L	.	.	.	.	.	.	.	.	V	A	K	P	N	L	V	X	T	I	X	S	F	W	K	G	E	.	.	.	S	L	D	P	H	K	A	P	G	.	.	D	A	L	V	T	.	.	V	L	D	G	E	G	K	Y	Y	V	D	G	K	P	.	.	.	.	.	F	I	V	K	K	G	E	S
Template Known Secondary structure		.	.						.	.	.	.	.	.	.	.				T	T										T	T		.	.	.								S	S	.	.						.	.											T	T			.	.	.	.	.					T	T
Template Predicted Secondary structure		.	.						.	.	.	.	.	.	.	.																		.	.	.										.	.						.	.															.	.	.	.	.
Template SS confidence
				140	.	.	.	.									.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.				.	.	.	.	.	.	.	.	170			.	.	.	.	.			.	.	.	.	180	.	.	.	.	.	.	.	.	.						190	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		V	I	S	P	S	W	S	I	H	S	G	V	G	.	T	K	A	Y	T	F	I	W	G	M
Query Conservation															.
Alig confidence															.
Template Conservation
Template Sequence		A	V	L	P	A	N	I	P	H	A	V	E	A	E	T	E	N	F	K	X	L	L	I	L
Template Known Secondary structure						T	T	S								S	S
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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