Job Description Q46938 Confidence 97.79% Date Thu Jan 5 12:35:57 GMT 2012 Rank 16 Aligned Residues 146 % Identity 13% Template c3myxA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein pspto_0244; PDBTitle: crystal structure of a pspto_0244 (protein with unknown function which2 belongs to pfam duf861 family) from pseudomonas syringae pv. tomato3 str. dc3000 at 1.30 a resolution Resolution 1.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.									.	.	.	.	.	.	150	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.
Query Sequence		V	I	N	I	G	G	A	G	T	I	T	V	D	G	Q	C	Y	E	I	G	H	R	D	A	L	Y	V	G	K	G	A	K	E	V	V	F	A	S	I	D	T	G	T	P	A	K	F	Y	Y	N	C	A	P	A	H	T	T	Y	P	T	K	K	V	T	.	.	.	.	.	.	.	.	P	D	E	V	S	P	V	T
Query Conservation																																																																		.	.	.	.	.	.	.	.
Alig confidence																																	.											.	.																					.	.	.	.	.	.	.	.
Template Conservation																																	.											.	.
Template Sequence		L	V	X	H	R	G	S	V	T	L	T	S	G	T	D	S	V	T	L	S	T	G	E	S	A	V	I	G	R	G	T	.	Q	V	R	I	D	A	Q	P	E	S	.	.	L	W	A	F	C	A	S	T	Q	A	S	G	P	D	K	S	G	I	T	A	L	D	R	L	A	L	L	T	P	S	S	P	P	D	P	S
Template Known Secondary structure							S							T	T							T	T							T	T		.								T	T		.	.									S			S					S						T	T											G	G
Template Predicted Secondary structure																																	.											.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	D	N	L	T	S	N	R	R	T	I	N	K	Y	F	V	P	D	V	L	E	T	C	Q	L	S	M	G	L	T	E	L	A	P	G	N	L	W	N	T	M	P	C	H	T	H	E	R	R	M	E	V	Y	F	Y	F	N	M	D	D	D	A	C	V	F	H	M	M	G	Q	P	Q	E	T	R	H	I	V	M
Query Conservation
Alig confidence																						.	.	.	.							.	.	.	.	.	.	.	.																															.	.	.
Template Conservation																						.	.	.	.							.	.	.	.	.	.	.	.																															.	.	.
Template Sequence		I	X	I	S	P	L	P	Q	C	R	S	N	N	L	F	E	D	T	A	S	.	.	.	.	T	L	R	I	G	V	.	.	.	.	.	.	.	.	W	D	S	T	P	Y	E	R	I	S	R	P	H	K	I	H	E	L	X	N	L	I	E	G	R	V	V	L	S	L	.	.	.	E	N	G	S	S	L	T	V	N
Template Known Secondary structure		G	B	S	S														S	S	S	.	.	.	.	S						.	.	.	.	.	.	.	.								B						S	S																.	.	.	T	T	S
Template Predicted Secondary structure																						.	.	.	.							.	.	.	.	.	.	.	.																															.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.					.	.	.	.	.	170									.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200				.	.	.	.	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	N	E	Q	A	V	I	S	P	S	W	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	G	D	T	V	F	V	A	Q	G	A	P
Template Known Secondary structure		T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions