Job Description Q46938 Confidence 97.40% Date Thu Jan 5 12:35:57 GMT 2012 Rank 19 Aligned Residues 168 % Identity 20% Template c3bu7A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:gentisate 1,2-dioxygenase; PDBTitle: crystal structure and biochemical characterization of gdosp,2 a gentisate 1,2-dioxygenase from silicibacter pomeroyi Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		81	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure												.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	N	I	G	G	A	G	T	I	T	.	V	D	G	Q	C	Y	E	I	G	H	R	D	A	L	Y	V	G	K	G	A	K	E	V	V	F	A	S	I	D	T	G	T	P	A	K	F	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation												.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.																					.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.
Template Sequence		F	I	M	E	G	S	G	A	Y	T	I	V	D	G	H	K	V	E	L	G	A	N	D	F	V	L	T	P	N	G	T	.	W	H	E	H	G	I	L	E	S	G	T	E	C	I	W	Q	D	G	L	D	I	P	L	T	N	C	L	E	A	N	F	Y	E	V	H	P	N	D	Y	Q	T	T	D	I	P	L	N	D
Template Known Secondary structure							S							T	T							T	T							T	T		.								T	T																		T	T								T	T	S	S							T	T
Template Predicted Secondary structure																																	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
														128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150					.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	Y	N	C	A	P	A	H	T	T	Y	P	T	K	K	V	T	P	D	E	V	S	P	V	.	.	.	.	T	L	G	D	N	L	T	S	N	R	R	T	I	N	K	Y	F	V	P	D	V	L	E	T	C	Q	L	S	M	G	L	T	E	L	A	P	G	N	L	W	N
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Template Conservation
Template Sequence		S	P	L	T	Y	G	G	P	A	L	L	P	Q	L	D	K	W	D	K	P	Y	S	P	L	L	K	Y	S	W	E	P	T	Y	E	A	L	L	N	Y	A	K	A	S	D	G	S	P	Y	D	G	L	I	L	R	Y	T	N	P	Q	T	G	G	H	P	M	L	T	M	G	A	S	M	Q	M	L	R	P	G	E	H
Template Known Secondary structure								S	T	T				S	S						S	S		S																		T	T				B	T	T	T	B								T	T	T	S	S		S	S	S	S										T	T		B
Template Predicted Secondary structure
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.			.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.
Query SS confidence																																																														.	.
Query Sequence		T	M	P	C	H	T	H	E	R	R	M	E	V	Y	F	Y	F	N	M	D	D	D	A	C	V	F	H	M	M	G	Q	P	Q	E	T	R	H	I	V	M	H	N	E	Q	A	V	I	S	P	S	W	S	I	H	S	G	V	G	T	K	.	.	A	Y	T	F	I	W	G	M
Query Conservation																																																														.	.
Alig confidence			.							.										.	.	.	.												.	.	.	.																								.	.
Template Conservation			.							.										.	.	.	.												.	.	.	.
Template Sequence		T	.	K	A	H	R	H	T	.	G	N	V	I	Y	N	V	A	K	.	.	.	.	G	Q	G	Y	S	I	V	G	G	K	R	.	.	.	.	F	D	W	S	E	H	D	I	F	C	V	P	A	W	T	W	H	E	H	C	N	T	Q	E	R	D	D	A	C	L	F	S	F
Template Known Secondary structure			.						S	.	S									.	.	.	.								T	T			.	.	.	.					T	T							T	T										S	S
Template Predicted Secondary structure			.							.										.	.	.	.												.	.	.	.
Template SS confidence
		287		.	.	290	.	.	.		.	.	.	.	.	.	300	.	.					.	.	.	.	.	.	.	310	.	.	.					.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions