Job Description Q46938 Confidence 97.53% Date Thu Jan 5 12:35:57 GMT 2012 Rank 17 Aligned Residues 176 % Identity 15% Template c2vqaC_ PDB info PDB header:metal-binding protein Chain: C: PDB Molecule:sll1358 protein; PDBTitle: protein-folding location can regulate mn versus cu- or zn-2 binding. crystal structure of mnca. Resolution 2.95 Å

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		80	.	.	.	.	.	.	.	.	.	90	.				.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure														.	.	.				.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.				.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	I	N	I	G	G	A	G	T	I	T	V	.	.	.	D	G	Q	.	.	C	Y	E	I	G	H	R	D	A	L	Y	V	G	K	G	A	K	E	V	V	F	A	S	I	D	T	G	T	P	A	K	F	Y	Y	N	C	A	P	A	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation														.	.	.				.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.				.	.																								.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.
Template Sequence		A	Y	V	M	E	G	R	T	R	I	T	L	T	S	P	E	G	K	V	E	I	A	D	V	D	K	G	G	L	W	Y	F	P	R	G	W	G	H	S	I	E	G	I	.	.	G	P	D	T	A	K	F	L	L	V	F	N	D	G	T	F	S	E	G	A	T	F	S	V	T	D	W	L	S	H	T	P	I	A	W
Template Known Secondary structure							S									T	T	S									T	T							T	T									.	.	S	S	S									S		T	T			G	G	G	S									T	S
Template Predicted Secondary structure																																													.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.			.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
																						135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.																		.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	Y	P	T	K	K	V	T	P	D	E	V	S	P	V	T	L	G	D	N	L	T	S	N	R	R	T	I	N	K	Y	F	V	P	D	V	L	E	T	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	E	E	N	L	G	W	T	A	A	Q	V	A	Q	L	P	K	K	Q	V	Y	I	S	S	Y	G	P	A	S	G	P	L	A	S	A	T	P	Q	G	Q	T	A	K	I	E	V	P	H	T	H	N	L	L	G	Q	Q	P	L	V	S	L	G	G	N	E	L	R	L	A	S	A	K	E	F	P	G	S	F	N	M
Template Known Secondary structure							T							T	T	S		S	S								S						G	G	G				S	S				B			S		S				S	T	T	S			S				T	T							S	T	T	T		T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.			.	.	250	.	.	.	.	.
Predicted Secondary structure																																																																								.	.
Query SS confidence																																																																								.	.
Query Sequence		S	M	G	L	T	E	L	A	P	G	N	L	W	N	T	M	P	C	H	T	H	E	R	R	M	E	V	Y	F	Y	F	N	M	D	D	D	A	C	V	F	H	M	M	G	Q	P	Q	E	T	R	H	I	V	M	H	N	E	Q	A	V	I	S	P	S	W	S	I	H	S	G	.	.	V	G	T	K	A	Y	T	F
Query Conservation																																																																								.	.
Alig confidence													.	.	.																			.	.	.																																				.	.
Template Conservation													.	.	.																			.	.	.
Template Sequence		T	G	A	L	I	H	L	E	P	G	A	.	.	.	M	R	Q	L	H	W	H	P	N	A	D	E	W	Q	Y	V	L	D	.	.	.	G	E	M	D	L	T	V	F	A	S	E	G	K	A	S	V	S	R	L	Q	Q	G	D	V	G	Y	V	P	K	G	Y	G	H	A	I	R	N	S	S	Q	K	P	L	D	I
Template Known Secondary structure										T	T		.	.	.								T	T										.	.	.	S										T	T									T	T							T	T									S	S	S
Template Predicted Secondary structure													.	.	.																			.	.	.
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.				.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.				.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
		256	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	W	G	M	V	G	E	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	V	F	N	D	G	D
Template Known Secondary structure						S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		342	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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