Job Description Q46938 Confidence 98.81% Date Thu Jan 5 12:35:57 GMT 2012 Rank 7 Aligned Residues 184 % Identity 9% Template c1sefA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved hypothetical protein; PDBTitle: crystal structure of cupin domain protein ef2996 from enterococcus2 faecalis Resolution 2.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.				130	.	.	.
Predicted Secondary structure																																																																											.	.	.
Query SS confidence																																																																											.	.	.
Query Sequence		V	S	V	G	G	E	V	G	K	Q	L	G	V	S	Y	F	L	E	R	R	E	L	G	V	I	N	I	G	G	A	G	T	I	T	V	D	G	Q	C	Y	E	I	G	H	R	D	A	L	Y	V	G	K	G	A	K	E	V	V	F	A	S	I	D	T	G	T	P	A	K	F	Y	Y	N	.	.	.	C	A	P	A
Query Conservation																																																																											.	.	.
Alig confidence					.	.																																																						.	.														.	.	.
Template Conservation					.	.																																																						.	.
Template Sequence		A	T	F	.	.	H	K	N	G	Q	Q	T	T	G	F	G	G	D	G	I	Q	T	L	V	Y	V	I	D	G	R	L	R	V	S	D	G	Q	E	T	H	E	L	E	A	G	G	Y	A	Y	F	T	P	E	M	K	M	Y	L	.	.	A	N	A	Q	E	A	D	T	E	V	F	L	Y	K	K	R	Y	Q	P	L
Template Known Secondary structure					.	.								S		S	S	B	T	T										S							S	S							T	T							T	T	S					.	.			S	S	S	S
Template Predicted Secondary structure					.	.																																																						.	.
Template SS confidence
		67	.	.			70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.			.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	T	T	Y	P	T	K	K	V	T	P	D	E	V	S	P	V	T	L	G	D	N	L	T	S	N	R	R	T	I	N	K	Y	F	V	P	D	V	L	E	T	C	Q	L	S	M	G	L	T	E	L	A	P	G	N	L	W	N	T	M	P	C	H	T	H	E	R	R	M	E	V	Y	F	Y	F	N	M	D	D	D
Query Conservation
Alig confidence																						.	.											.						.																	.	.	.																.	.	.
Template Conservation																						.	.											.						.																	.	.	.																.	.	.
Template Sequence		A	G	H	Q	P	Y	K	V	V	G	S	I	H	D	Q	Q	P	E	E	Y	.	.	E	G	M	T	D	V	L	L	W	S	.	L	L	P	K	E	.	F	D	F	D	M	N	M	H	I	L	S	F	E	P	G	A	.	.	.	S	H	A	Y	I	E	T	H	V	Q	E	H	G	A	Y	.	.	.	L	I	S	G
Template Known Secondary structure		T	T										G	G	G	S					G	.	.	G	G		T	T						.		S		S	S	.	T	T		S										T	T		.	.	.	B		S	S		B			S							.	.	.
Template Predicted Secondary structure																						.	.											.						.																	.	.	.																.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.			.	.	.	.	.	.	.	170	.	.		.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.				.	.	.	.	.	.	200	.	.	.	.	.	.	.	.				.	210	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		A	C	V	F	H	M	M	G	Q	P	Q	E	T	R	H	I	V	M	H	N	E	Q	A	V	I	S	P	S	W	S	I	H	S	G	V	G	T	K	.	A	Y	T	F	I	W	G	M
Query Conservation																																								.
Alig confidence												.	.	.	.	.																								.
Template Conservation												.	.	.	.	.
Template Sequence		Q	G	M	Y	N	L	D	N	E	W	.	.	.	.	.	Y	P	V	E	K	G	D	Y	I	F	M	S	A	Y	V	P	Q	A	A	Y	A	V	G	R	E	E	P	L	M	Y	V	Y
Template Known Secondary structure								T	T			.	.	.	.	.					T	T							T	T										S	S	S
Template Predicted Secondary structure												.	.	.	.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.						.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions