Return to main results Retrieve Phyre Job Id

Job DescriptionP32705
Confidence1.99%DateThu Jan 5 11:50:26 GMT 2012
Rank99Aligned Residues171
% Identity14%Templated1l7va_
SCOP infoABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC
Resolution3.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40.........50.........60.........70.........80.........90.........100.... ...
Predicted Secondary structure 













.
Query SS confidence 











































































.


Query Sequence  QPTNWQAIIMFLIFVVFTLGITYWASKRVRSRSDYYTAGGNITGFQNGLAIAGDYMSAASFLGISALVFTSGYDGL. IYS
Query Conservation     
     
   
    
 

    
   
  

  


         
  

  
    

  
  
  
    .   
Alig confidence 











































































.


Template Conservation                                    


 

 

    
    
              

 

        
Template Sequence  QLPNWALGLCAIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSALXTWAIYFSTSVDLRQLXYWXXGGFGGVDWRQ
Template Known Secondary structure  T

T





T


TT

GGG
Template Predicted Secondary structure 














Template SS confidence 















































































   111........120.........130.........140.........150.........160.........170.........180.........190
 
   108.110.........120.........130.........140.........150.........160........ .170.........
Predicted Secondary structure 






........


Query SS confidence 




























































. . . . . . . .










Query Sequence  LGFLVGWPIILFLIAERLRNLGRYTFADVASYRLKQGPIRILSACGSLVVVALYLIAQMVG. . . . . . . . AGKLIELLFGL
Query Conservation          
         

    
  
 
  

         
   
   
     

  ........    
    
 
Alig confidence 




























































........










Template Conservation 
          
        
  
 

   
 





   
   
    

 
  

 

 
 




 




 
   
Template Sequence  SWLXLALIPVLLWICCQSRPXNXLALGEISARQLGLPLWFWRNVLVAATGWXVGVSVALAGAIGFIGLVIPHILRLCGLT
Template Known Secondary structure 

TT





SSSSTT

Template Predicted Secondary structure 















Template SS confidence 















































































   191........200.........210.........220.........230.........240.........250.........260.........270
 
   180.........190.........
Predicted Secondary structure 
Query SS confidence 



















Query Sequence  NYHIAVVLVGVLMMMYVLFG
Query Conservation       
 
   
   

  
Alig confidence 



















Template Conservation       
  
 
 

 


 
Template Sequence  DHRVLLPGCALAGASALLLA
Template Known Secondary structure  S
Template Predicted Secondary structure 

Template SS confidence 



















   271........280.........290
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions