Job Description P32705 Confidence 2.48% Date Thu Jan 5 11:50:26 GMT 2012 Rank 70 Aligned Residues 42 % Identity 12% Template c2z73B_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:rhodopsin; PDBTitle: crystal structure of squid rhodopsin Resolution 2.50 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.											.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.
Query Sequence		V	E	R	Q	P	T	N	W	Q	A	I	I	M	F	L	I	F	V	V	F	T	L	G	I	T	Y	W	A	.	.	.	.	.	.	.	.	.	.	S	K	R	V	R	S	R	S	D	Y	Y	T	A	G
Query Conservation																														.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	E	F	D	Q	V	P	D	A	V	Y	Y	S	L	G	I	F	I	G	I	C	G	I	I	G	C	G	G	N	G	I	V	I	Y	L	F	T	K	T	K	S	L	Q	T	P	A	N	M	F	I	I	N
Template Known Secondary structure			T	S																																					G	G	G			T	T
Template Predicted Secondary structure
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions