|   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | |
. | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |
|
|
|  |  | . |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | L | T | S | A | L | S | Q | R | L | I | A | D | Q | L | R | L | T | T | A | E | S | C | T | G | G | K | L | A | S | A | L | C | A | A | E | D | T | P | K | F | Y | G | A | G | F | V | T | F | T | D | Q | A | K | M | K | I | L | S | V | S | Q | Q | . |
S | L | E | R | Y | S | A | V | S | E | K | V | A | A | E | M |
Query Conservation |   |
  |
|
|   |   |
|   |   |
|
|   |   |   |   |   |
|
|
|   |
|
|
|   |
|
|
|
|
|
|
|   |
|
|   |
|
|
|
|
|   |
|
|   |
|
|   |
|   |
|
|   |   |   |
|   |   |   |
|
|
|   |   |   | . |   |
|   |   |   |
|   |
|
|   |
|
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |
|
|
|
|
|   |
|
|
|   |   |
|   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
Template Sequence |   |
D | V | A | A | T | L | K | A | K | L | G | L | E | K | P | P | Y | L | I | L | G | A | C | N | P | N | L | A | A | R | A | L | E | A | L | P | E | I | G | L | L | L | P | C | N | V | V | L | R | E | A | E | E | G | V | E | V | L | I | Q | D | P | K | E | M | F | R | V | L | P | E | A | T | Q | R | A | L | A | P | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
| G | G | G | G | G | G |
| S |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |
|
|  |  |  |  | G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
35 | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . |
  |
  |   |
98 | . | 100 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
A | T | G | A | I | E | R | A |
Query Conservation |   |
|   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |
|
Template Sequence |   |
A | E | E | A | R | T | R | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
115 | . | . | . | . | 120 | . | . |
  |