Return to main results Retrieve Phyre Job Id

Job DescriptionP39280
Confidence99.80%DateThu Jan 5 11:58:50 GMT 2012
Rank3Aligned Residues196
% Identity15%Templated1tv8a_
SCOP infoTIM beta/alpha-barrel Radical SAM enzymes MoCo biosynthesis proteins
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   110.........120.........130........ .140.........150.........160.........170.........180..
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Query Sequence  NRALLLVKGGCAVNCRYCFRRHFPYAENQ. . . . . . . GNKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL
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Template Sequence  RDLRLSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAEL. GVKKIRITGGEPLMRRD. . LDVLIAKL
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TTTS
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GGGS

T.T

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   14.....20.........30.........40.........50.........60..... ....70.........80.. .......90
 
   183......190.........200.........210.........220..... ....230.........240.........250...
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Query Sequence  EAIPHIKRLRIHSRLPIVIPARITEALVECFARSTLQILLVNH. . . . . . . . . INHANEVDETFRQAMAKLRRVGVTLLNQ
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Template Sequence  NQIDGIEDIGLTTNGLL. . . . . LKKHGQKLYDAGLRRINVSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGLNVKVN
Template Known Secondary structure  TT
TT


STT.....T




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TT
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   91........100....... ..110.........120.........130.........140.........150.........160.....
 
   254.....260.........270.........280.........290.........300.........310.....
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Query Sequence  SVLLRDVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVS
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Template Sequence  VVIQKGINDD. . QIIPMLEYFKDKHIEIRFIEFMDVGNDNGWDFSKVVTKDEMLTMIEQHFE
Template Known Secondary structure 
TTTTGG..GTT




B
SSSSB

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   166...170..... ....180.........190.........200.........210.........220.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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