Job Description P39280 Confidence 22.02% Date Thu Jan 5 11:58:50 GMT 2012 Rank 114 Aligned Residues 77 % Identity 14% Template c3ktsA_ PDB info PDB header:transcriptional regulator Chain: A: PDB Molecule:glycerol uptake operon antiterminator regulatory protein; PDBTitle: crystal structure of glycerol uptake operon antiterminator regulatory2 protein from listeria monocytogenes str. 4b f2365 Resolution 2.75 Å

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		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280																		.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	R	Q	A	M	A	K	L	R	R	V	G	V	T	L	L	N	Q	S	V	L	L	R	D	V	N	D	N	A	Q	T	L	A	N	L	S	N	A	L	F	D	A	G	V	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Y	Y	L	H	V	L	D	K	V	Q	G	A	A	H	F	M	V
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.	.	.
Template Sequence		L	K	A	L	V	K	Y	A	Q	A	G	G	K	K	V	L	L	H	A	D	L	V	N	G	L	K	N	D	D	Y	A	I	D	F	L	C	T	E	I	C	P	D	G	I	I	S	T	R	G	N	A	I	M	K	A	K	Q	H	K	M	L	A	I	Q	R	L	F	M	I	D	.	.	.	.	.	.	.	.	S	S
Template Known Secondary structure												T	T							G	G	G			T				S										T	T			S					S											T	T											S	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110									.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	D	E	A	R	Q	I	M	R	E	L	L	T	L	V	S	G	Y	L	V	P	K	L	A	R	E	I	G	G
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.
Template Sequence		A	Y	N	K	G	V	A	L	I	Q	K	.	.	.	.	.	.	.	.	V	Q	P	D	C	I	E	L	L	P	G
Template Known Secondary structure													.	.	.	.	.	.	.	.				S							T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.									.	.	.	.	.	.	130	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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