Job Description P39280 Confidence 25.31% Date Thu Jan 5 11:58:50 GMT 2012 Rank 100 Aligned Residues 153 % Identity 16% Template c3g8rA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:probable spore coat polysaccharide biosynthesis protein e; PDBTitle: crystal structure of putative spore coat polysaccharide biosynthesis2 protein e from chromobacterium violaceum atcc 12472 Resolution 2.49 Å

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		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	N	K	R	N	W	Q	T	A	L	E	Y	V	A	A	H	P	E	L	D	E	M	I	F	S	G	G	D	P	L	M	A	K	D	H	E	L	D	W	L	L	T	Q	L	E	A	I	P	H	I	K	R	L	R	I	H	S	R	L	P	I	V	I	P	A	R	I	T	E	A	L	V	E	C	F	A	R	S	T
Query Conservation
Alig confidence																			.			.												.	.	.	.	.	.	.	.	.								.																	.	.	.	.	.	.
Template Conservation																			.			.												.	.	.	.	.	.	.	.	.								.																	.	.	.	.	.	.
Template Sequence		R	L	Q	P	E	Q	X	Q	K	L	V	A	E	X	K	A	N	.	G	F	.	K	A	I	C	T	P	F	D	E	E	S	.	.	.	.	.	.	.	.	.	V	D	L	I	E	A	H	.	G	I	E	I	I	K	I	A	S	C	S	F	T	D	W	P	.	.	.	.	.	.	L	L	E	R	I	A	R	S	D
Template Known Secondary structure																		T	.	T		.								S				.	.	.	.	.	.	.	.	.							T	.	T								S	S	S	T	T				.	.	.	.	.	.							T	S
Template Predicted Secondary structure																			.			.												.	.	.	.	.	.	.	.	.								.																	.	.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90		.	.		.	.	.	.	.	.	.	100	.	.	.										.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.							.	.	.	130	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.																										.	.	.	260	.	.	.	.	.	.				.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Query Sequence		L	Q	I	L	L	V	N	H	I	N	H	A	N	E	V	D	E	T	F	R	Q	A	M	A	K	L	R	R	V	G	V	T	L	L	N	Q	S	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	D	V	N	D	N	A	Q	T	.	.	.	L	A	N
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Alig confidence														.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Template Conservation														.	.	.	.
Template Sequence		K	P	V	V	A	S	T	A	G	A	R	R	.	.	.	.	E	D	I	D	K	V	V	S	F	X	L	H	R	G	K	D	L	T	I	X	H	C	V	A	E	Y	P	T	P	D	D	H	L	H	L	A	R	I	K	T	L	R	Q	Q	Y	A	G	V	R	I	G	Y	S	T	H	E	D	P	D	L	X	E	P	I
Template Known Secondary structure		S							T	T				.	.	.	.												T	T	T												S	S			G	G	G			T	T										T	T	S										S	S
Template Predicted Secondary structure														.	.	.	.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.					.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	N	A	L	F	D	A	G	V	M	P	Y	Y	L	H	V	L	D	K	V	Q	G	A	A	H	F	M	V	S	D	D	E	A	R	Q	I	M	R	E	L	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	L	A	V	A	Q	G	A	T	V	F	E	K	H	V	G	L	P	T	D	Q	Y	G	I	N	N	Y	S	A	N	P	E	Q	V	R	R	W	L	A	A	A	A	R
Template Known Secondary structure							T	T								B				B	T	T	B				T	T		B
Template Predicted Secondary structure
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions