Return to main results Retrieve Phyre Job Id

Job DescriptionP39280
Confidence58.80%DateThu Jan 5 11:58:50 GMT 2012
Rank39Aligned Residues134
% Identity12%Templatec3g0sA_
PDB info PDB header:lyaseChain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: dihydrodipicolinate synthase from salmonella typhimurium lt2
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   135....140.........150.........160.... .....170.........180. ........190.........200.........210.
Predicted Secondary structure 











..






.












Query SS confidence 





























. .
















.





























Query Sequence  AENQGNKRNWQTALEYVAAHPELDEMIFSG. . GDPLMAKDHELDWLLTQ. LEAIPHIKRLRIHSRLPIVIPARITEALVE
Query Conservation         
 
   
  
     
 





..



      
  

  .
  
  
  


 
      
 

   

 
Alig confidence 



















.








..
















.



















...






Template Conservation   

 

       
      .

 

   




   

 


  
             

 

   
  ...  
  
 
Template Sequence  EKGNVSRSCLKKLIDYHVAN. GTSAIVSVGTTGESATLSHDEHGDVVMMTLELADGRIPVIAGTGANATA. . . EAISLTQ
Template Known Secondary structure  TTS
B
T.T

SSTTTTGGGS
TTSS



SS...
Template Predicted Secondary structure 






.



















...
Template SS confidence 















































































   15....20.........30.... .....40.........50.........60.........70.........80... ......90
 
   212.......220.........230.........240...... ...250... ......260.........270..
Predicted Secondary structure 











.

.





Query SS confidence 


































.






.


















Query Sequence  CFARSTLQILLVNHINHANEVDETFRQAMAKLRRV. GVTLLNQ. SVLLRDVNDNAQTLANLSN
Query Conservation   
      
    
  
  


     

  
   .
  
  
.



 



  
 
  
  
Alig confidence 


































.






.


















Template Conservation   
   


 
 
  
 
   
   
      

     

 


 
   
   
      
  
Template Sequence  RFNDSGIVGCLTVTPYYNRPTQEGLFQHFKAIAEHTDLPQILYNVPSRTGCDMLPETVGRLAE
Template Known Secondary structure  TTTTSS




SS


T
SS

S



T
Template Predicted Secondary structure 



























Template SS confidence 






























































   91........100.........110.........120.........130.........140.........150...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions