Job Description P39280 Confidence 47.16% Date Thu Jan 5 11:58:50 GMT 2012 Rank 50 Aligned Residues 136 % Identity 10% Template c3b4uB_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from agrobacterium2 tumefaciens str. c58 Resolution 1.20 Å

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		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.			.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																																	.	.																										.
Query SS confidence																																	.	.																										.
Query Sequence		Y	A	E	N	Q	G	N	K	R	N	W	Q	T	A	L	E	Y	V	A	A	H	P	E	L	D	E	M	I	F	S	G	.	.	G	D	P	L	M	A	K	D	H	E	L	D	W	L	L	T	Q	L	E	A	I	P	H	I	K	.	R	L	R	I	H	S	R	L	P	I	V	I	P	A	R	I	T	E	A	L	V
Query Conservation																																	.	.																										.
Alig confidence																							.										.	.																										.													.	.	.
Template Conservation																							.																																																		.	.	.
Template Sequence		K	T	D	G	T	V	D	I	D	A	M	I	A	H	A	R	R	C	L	S	N	.	G	C	D	S	V	T	L	F	G	T	T	G	E	G	C	S	V	G	S	R	E	R	Q	A	I	L	S	S	F	I	A	A	G	I	A	P	S	R	I	V	T	G	V	L	V	D	S	I	E	.	.	.	D	A	A	D	Q	S
Template Known Secondary structure			T	T	S	S	B															T	.	T		S					S	S	T	T	T	T	G	G	G	S		T	T												T	T			G	G	G								S	S			.	.	.
Template Predicted Secondary structure																							.																																																		.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.				.	.	.	.	90	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.	.	.					.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																									.														.	.	.	.									.
Query SS confidence																									.														.	.	.	.									.
Query Sequence		E	C	F	A	R	S	T	L	Q	I	L	L	V	N	H	I	N	H	A	N	E	V	D	.	E	T	F	R	Q	A	M	A	K	L	R	R	V	.	.	.	.	G	V	T	L	L	N	Q	S	.	V	L	L	R	D	V	N	D	N	A	Q	T	L	A	N	L	S	N	A
Query Conservation																									.														.	.	.	.									.
Alig confidence																									.														.	.	.	.									.
Template Conservation
Template Sequence		A	E	A	L	N	A	G	A	R	N	I	L	L	A	P	P	S	Y	F	K	N	V	S	D	D	G	L	F	A	W	F	S	A	V	F	S	K	I	G	K	D	A	R	D	I	L	V	Y	N	I	P	S	V	T	M	V	T	L	S	V	E	L	V	G	R	L	K	A	A
Template Known Secondary structure							T	T		S									S	S		S																			T	T														S
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions