Job Description P39280 Confidence 99.13% Date Thu Jan 5 11:58:50 GMT 2012 Rank 12 Aligned Residues 143 % Identity 18% Template c2z2uA_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:upf0026 protein mj0257; PDBTitle: crystal structure of archaeal tyw1 Resolution 2.40 Å

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		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.																					.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Query Sequence		C	A	V	N	C	R	Y	C	F	R	R	H	F	P	Y	A	E	N	Q	G	N	K	R	N	W	Q	T	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Y	V	A	A	H	P	E	L	D	E	M	I	F	S	G	.	G	D	P	L	M	A	K	D	H	E	L	D	W	L
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.									.	.
Template Conservation																																																																												.	.
Template Sequence		C	T	P	S	V	I	W	C	Q	Q	N	S	Q	I	K	E	P	K	W	E	E	P	E	V	V	Y	E	K	I	L	A	M	H	K	R	I	I	M	G	Y	A	G	V	L	D	R	V	G	E	K	K	F	K	E	A	L	E	P	K	H	V	A	I	S	L	S	G	E	P	T	L	Y	P	Y	.	.	L	D	E	L
Template Known Secondary structure				S		S	S			S					S																									G	G	G	G	G													T	S								S	S	S		G	G	G	S	T	T	.	.
Template Predicted Secondary structure																																																																												.	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.					.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.
Query SS confidence																																																	.	.	.	.
Query Sequence		L	T	Q	L	E	A	I	P	H	I	K	R	L	R	I	H	S	R	L	P	I	V	I	P	A	R	I	T	E	A	L	V	E	C	F	A	R	S	T	L	Q	I	L	L	V	N	H	.	.	.	.	I	N	H	A	N	E	V	D	E	T	F	R	Q	A	M	A	K	L	R	R	V	G	V	T	L	L	N	Q	S
Query Conservation																																																	.	.	.	.
Alig confidence									.				.								.	.	.	.	.	.	.																						.	.	.	.																										.
Template Conservation									.				.								.	.	.	.	.	.	.																																																			.
Template Sequence		I	K	I	F	H	K	N	.	G	F	T	.	T	F	V	V	S	N	G	.	.	.	.	.	.	.	I	L	T	D	V	I	E	K	I	E	P	T	Q	L	Y	I	S	L	D	A	Y	D	L	D	S	Y	G	G	K	K	E	Y	W	E	S	I	L	N	T	L	D	I	L	K	E	K	K	R	T	C	.	I	R	T
Template Known Secondary structure								T	.	T			.							S	.	.	.	.	.	.	.												S									S	S	T	T	T																			T	T	S	S	S			.
Template Predicted Secondary structure									.				.								.	.	.	.	.	.	.																																																			.
Template SS confidence
		149	150	.	.	.	.	.		.	.	.		.	160	.	.	.	.	.								.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	L	R	D	V	N	D	N	A	Q	T	L	A	N	L	S	N	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	I	R	G	Y	N	D	D	I	L	K	F	V	E	L	Y	E	R	A
Template Known Secondary structure					T	T	T	T			G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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