Job Description P39280 Confidence 99.70% Date Thu Jan 5 11:58:50 GMT 2012 Rank 4 Aligned Residues 194 % Identity 14% Template c2yx0A_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:radical sam enzyme; PDBTitle: crystal structure of p. horikoshii tyw1 Resolution 2.21 Å

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		113	.	.	.	.				.	.	120	.	.	.	.	.	.	.	.	.	130	.						.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.																		.	.	.	.	.	160	.	.	.	.		.	.
Predicted Secondary structure							.	.	.															.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query SS confidence							.	.	.															.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query Sequence		L	L	L	V	K	.	.	.	G	G	C	A	V	N	C	R	Y	C	F	R	R	H	.	.	.	.	.	F	P	Y	A	E	N	Q	G	N	K	R	N	W	Q	T	A	L	E	Y	V	A	A	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	L	D	E	M	I	F	S	G	.	G	D
Query Conservation							.	.	.															.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Alig confidence							.	.	.															.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation
Template Sequence		C	L	Q	M	T	P	V	L	A	W	C	T	H	N	C	I	F	C	W	R	P	M	E	N	F	L	G	T	E	L	P	Q	P	W	D	D	P	A	F	I	V	E	E	S	I	K	A	Q	R	K	L	L	I	G	Y	K	P	K	V	D	K	K	K	F	E	E	A	W	N	P	T	H	A	A	I	S	L	S	G	E
Template Known Secondary structure							S		S	S			S	B			T	T				S	S	S	S		S		S	S			S	S																				T	T					S									T	S								S	S	S
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.												.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	L	M	A	K	D	H	E	L	D	W	L	L	T	Q	L	E	A	I	P	H	I	K	R	L	R	I	H	S	R	L	P	I	V	I	P	A	R	I	T	E	A	L	V	E	C	F	A	R	S	T	L	Q	I	L	L	V	N	H	.	.	.	.	.	.	.	.	.	.	.	I	N	H	A	N	E	V	D	E	T
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.														.	.									.	.							.	.																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.														.	.									.	.							.	.
Template Sequence		P	M	L	Y	P	Y	.	.	M	G	D	L	V	E	E	F	H	K	R	G	F	.	.	T	T	F	I	V	T	N	G	.	.	T	I	P	E	R	L	.	.	E	E	M	I	K	E	D	K	L	P	T	Q	L	Y	V	S	I	T	A	P	D	I	E	T	Y	N	S	V	N	I	P	M	I	P	D	G	W	E	R
Template Known Secondary structure		G	G	G	S	T	T	.	.											T	T		.	.								S	.	.							.	.						T	T				S									S	S										B	S	S	S
Template Predicted Secondary structure								.	.														.	.									.	.							.	.
Template SS confidence
		153	.	.	.	.	.			.	160	.	.	.	.	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.			180	.	.	.	.	.			.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	R	Q	A	M	A	K	L	R	R	V	G	V	T	L	L	N	Q	S	V	L	L	R	D	V	N	D	N	A	Q	T	L	A	N	L	S	N	A	L	F	D	A	G	V	M	P	Y	Y	L	H	V	L	D	K	V	Q	G	A	A	H	F	M	V	S	D	D	E	A	R	Q	I	M	R	E	L	L	T	L	V	S
Query Conservation
Alig confidence																														.	.																									.
Template Conservation																														.	.																									.
Template Sequence		I	L	R	F	L	E	L	M	R	D	L	P	T	R	T	V	V	R	L	T	L	V	K	G	E	N	M	H	.	.	S	P	E	K	Y	A	K	L	I	L	K	A	R	P	M	F	V	E	A	K	A	Y	M	N	.	R	L	T	I	N	N	M	P	S	H	Q	D	I	R	E	F	A	E	A	L	V	K	H	L	P
Template Known Secondary structure										T	T		S	S										T	T	T	T			.	.															S										.				G	G	G	S															T	T		T
Template Predicted Secondary structure																														.	.																									.
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.			.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		316	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Y
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		308	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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