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Job DescriptionP39280
Confidence99.47%DateThu Jan 5 11:58:50 GMT 2012
Rank10Aligned Residues201
% Identity12%Templatec2qgqF_
PDB info PDB header:structural genomics, unknown functionChain: F: PDB Molecule:protein tm_1862; PDBTitle: crystal structure of tm_1862 from thermotoga maritima.2 northeast structural genomics consortium target vr77
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   124.....130.........140.........150.........160.........170.... .....180.........190........
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Query Sequence  CRYCFRRHFPYAENQGNKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHE. . . . . LDWLLTQLEAIPHIKRLRIHSRLP
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Template Sequence  RPYAYVKISDGSLRSRSIEDITREVEDLLKE. GKKEIILVAQDTTSYGIDLYRKQALPDLLRRLNSLNGEFWIRVXY. . .
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   137..140.........150.........160....... ..170.........180.........190.........200.........210..
 
   199200.........210.........220 .........230. ........240.........250.........260 ......
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Query Sequence  IVIPARITEALVECFARSTLQI. LLVNHINHANE. . . . . . . . . . VDETFRQAMAKLRRVGVTLLNQSVLLRDV. NDNAQT
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Template Sequence  . LHPDHLTEEIISAXLELDKVVKYFDVPVQHGSDKILKLXGRTKSSEELKKXLSSIRERFPDAVLRTSIIVGFPGETEED
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GGG


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   228.230.........240.........250.........260.........270.........280.........290.........300......
 
   267..270.........280.........290.........300.........310... ......320.........
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Query Sequence  LANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTL. . . . VSGYLVPKLAREIGGE
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Template Sequence  FEELKQFVEEIQFDKLGAFVYSDKVDPEXAKRRQEELLLLQAEISNSRLDRFVGKKLKFLVEGKEGK
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   307..310.........320.........330.........340.........350.........360.........370...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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