Job Description P39280 Confidence 100.00% Date Thu Jan 5 11:58:50 GMT 2012 Rank 1 Aligned Residues 334 % Identity 32% Template c2a5hC_ PDB info PDB header:isomerase Chain: C: PDB Molecule:l-lysine 2,3-aminomutase; PDBTitle: 2.1 angstrom x-ray crystal structure of lysine-2,3-aminomutase from2 clostridium subterminale sb4, with michaelis analog (l-alpha-lysine3 external aldimine form of pyridoxal-5'-phosphate). Resolution 2.10 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	T	P	S	R	E	D	W	L	T	Q	L	A	D	V	V	T	D	P	D	E	L	L	R	L	L	N	I	D	A	E	E	K	L	L	A	G	R	S	A	K	K	L	F	A	L	R	V	P	R	S	F	I	D	R	M	E	K	G	N	P	D	D	P	L	L	R	Q	V	L	T	S	Q	D	E	F	V	I	A
Query Conservation
Alig confidence																																									.
Template Conservation																																									.
Template Sequence		V	S	D	A	D	W	N	D	W	R	W	Q	V	R	N	R	I	E	T	V	E	E	L	K	K	Y	I	P	L	T	K	E	E	E	E	G	V	A	Q	.	C	V	K	S	L	R	X	A	I	T	P	Y	Y	L	S	L	I	D	P	N	D	P	N	D	P	V	R	K	Q	A	I	P	T	A	L	E	L	N	K	A
Template Known Secondary structure								T								T		B		S						T	T	S												T	.		T	T	S					B						T	T	S		T	T		T	T								S			G	G	G	G
Template Predicted Secondary structure																																									.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		87	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure													.																																											.
Query SS confidence													.																																											.
Query Sequence		P	G	F	S	T	D	P	L	E	E	Q	.	H	S	V	V	P	G	L	L	H	K	Y	H	N	R	A	L	L	L	V	K	G	G	C	A	V	N	C	R	Y	C	F	R	R	H	F	P	Y	A	E	N	Q	G	.	N	K	R	N	W	Q	T	A	L	E	Y	V	A	A	H	P	E	L	D	E	M	I	F	S	G
Query Conservation													.																																											.
Alig confidence													.																																											.
Template Conservation
Template Sequence		A	A	D	L	E	D	P	L	H	E	D	T	D	S	P	V	P	G	L	T	H	R	Y	P	D	R	V	L	L	L	I	T	D	X	C	S	X	Y	C	R	H	C	T	R	R	R	F	A	G	Q	S	D	D	S	X	P	X	E	R	I	D	K	A	I	D	Y	I	R	N	T	P	Q	V	R	D	V	L	L	S	G
Template Known Secondary structure		T	T		B	S	S	T	T		T	T	T	S		S	B	T	T					S	S	S								S			S	S			T	T		T	T	T	T	T	T	T	S	S	S	S	B															T		T	T
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	P	L	M	A	K	D	H	E	L	D	W	L	L	T	Q	L	E	A	I	P	H	I	K	R	L	R	I	H	S	R	L	P	I	V	I	P	A	R	I	T	E	A	L	V	E	C	F	A	R	S	T	L	Q	I	L	L	V	N	H	I	N	H	A	N	E	V	D	E	T	F	R	Q	A	M	A	K	L	R
Query Conservation
Alig confidence																																																							.
Template Conservation																																																							.
Template Sequence		G	D	A	L	L	V	S	D	E	T	L	E	Y	I	I	A	K	L	R	E	I	P	H	V	E	I	V	R	I	G	S	R	T	P	V	V	L	P	Q	R	I	T	P	E	L	V	N	X	L	K	K	Y	H	.	P	V	W	L	N	T	H	F	N	H	P	N	E	I	T	E	E	S	T	R	A	C	Q	L	L	A
Template Known Secondary structure		S		T	T	S	S													T	T	S	T	T									S						G	G	G											T	T		.	S									S	G	G	G
Template Predicted Secondary structure																																																							.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	G	V	T	L	L	N	Q	S	V	L	L	R	D	V	N	D	N	A	Q	T	L	A	N	L	S	N	A	L	F	D	A	G	V	M	P	Y	Y	L	H	V	L	D	K	V	Q	G	A	A	H	F	M	V	S	D	D	E	A	R	Q	I	M	R	E	L	L	T	L	V	S	G	Y	L	V	P	K	L	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	G	V	P	L	G	N	Q	S	V	L	L	R	G	V	N	D	C	V	H	V	X	K	E	L	V	N	K	L	V	K	I	R	V	R	P	Y	Y	I	Y	Q	C	D	L	S	L	G	L	E	H	F	R	T	P	V	S	K	G	I	E	I	I	E	G	L	R	G	H	T	S	G	Y	C	V	P	T	F	V	V
Template Known Secondary structure			T	T											T	T	T	T		S														T	T												B	T	T		G	G	G													T	T	T	T	T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		325	.	.	.	.	330	.	.	.	.	.	.		.	.	.	340	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		E	I	G	G	E	P	S	K	T	P	L	D	.	L	Q	L	R	Q	Q
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		D	A	P	G	G	G	G	K	T	P	V	X	P	N	Y	V	I	S	Q
Template Known Secondary structure				T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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