Job Description P39280 Confidence 32.58% Date Thu Jan 5 11:58:50 GMT 2012 Rank 72 Aligned Residues 153 % Identity 16% Template c1xuzA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:polysialic acid capsule biosynthesis protein siac; PDBTitle: crystal structure analysis of sialic acid synthase (neub)from2 neisseria meningitidis, bound to mn2+, phosphoenolpyruvate, and n-3 acetyl mannosaminitol Resolution 2.20 Å

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		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	N	K	R	N	W	Q	T	A	L	E	Y	V	A	A	H	P	E	L	D	E	M	I	F	S	G	G	D	P	L	M	A	K	D	H	E	L	D	W	L	L	T	Q	L	E	A	I	P	H	I	K	R	L	R	I	H	S	R	L	P	I	V	I	P	A	R	I	T	E	A	L	V	E	C	F	A	R	S	T
Query Conservation
Alig confidence																			.			.												.	.	.	.	.	.	.	.	.								.																	.	.	.	.	.	.
Template Conservation																			.			.												.	.	.	.	.	.	.	.	.								.																	.	.	.	.	.	.
Template Sequence		A	L	N	E	E	D	E	I	K	L	K	E	Y	V	E	S	K	.	G	M	.	I	F	I	S	T	P	F	S	R	A	A	.	.	.	.	.	.	.	.	.	A	L	R	L	Q	R	M	.	D	I	P	A	Y	K	I	G	S	G	E	C	N	N	Y	P	.	.	.	.	.	.	L	I	K	L	V	A	S	F	G
Template Known Secondary structure																		T	.	T		.								S				.	.	.	.	.	.	.	.	.								.	T		S						G	G	G	T	T				.	.	.	.	.	.							T	T
Template Predicted Secondary structure																			.			.												.	.	.	.	.	.	.	.	.								.																	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.		.	.	.	.	110	.	.	.	.	.	.										.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.							140	.	.	.	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.																										.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query Sequence		L	Q	I	L	L	V	N	H	I	N	H	A	N	E	V	D	E	T	F	R	Q	A	M	A	K	L	R	R	V	G	V	T	L	L	N	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	L	L	R	D	V	N	D	N	A	Q	.	T	L	A	N	L	S
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Alig confidence														.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation														.	.	.	.
Template Sequence		K	P	I	I	L	S	T	G	M	N	S	I	.	.	.	.	E	S	I	K	K	S	V	E	I	I	R	E	A	G	V	P	Y	A	L	L	H	C	T	N	I	Y	P	T	P	Y	E	D	V	R	L	G	G	M	N	D	L	S	E	A	F	P	D	A	I	I	G	L	S	D	H	T	L	D	N	Y	A	C	L	G
Template Known Secondary structure		S							T	T				.	.	.	.														T												S	S								T	T										T	T	S								S	S	S	S
Template Predicted Secondary structure														.	.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160					.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.		.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		N	A	L	F	D	A	G	V	M	P	Y	Y	L	H	V	L	D	K	V	Q	G	A	A	H	.	F	M	V	S	D	D	E	A	R	Q	I	M	R	E	L	L	T
Query Conservation																										.
Alig confidence																										.
Template Conservation
Template Sequence		A	V	A	L	G	G	S	I	L	E	R	H	F	T	D	R	M	D	R	P	G	P	D	I	V	C	S	M	N	P	D	T	F	K	E	L	K	Q	G	A	H	A
Template Known Secondary structure						T								B		S		T	T			S	T	T	G	G	G		B
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions