 |
Job Description | P77245 | Confidence | 96.93% | Date | Thu Jan 5 12:26:46 GMT 2012 |
Rank | 52 | Aligned Residues | 96 |
% Identity | 23% | Template | c3ujhB_ |
PDB info |
PDB header:isomerase | Chain: B: PDB Molecule:glucose-6-phosphate isomerase; |
PDBTitle: crystal structure of substrate-bound glucose-6-phosphate isomerase2 from toxoplasma gondii
|
Resolution | 2.10 Å |
|
 |
  |   |
123 | . | . | . | . | . | . | 130 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | 160 | . | . | . | . | . | . | . | . | |
|
. | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |
|
|
|
|  |  |  |  |
| . | . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | R | L | Q | K | I | I | E | V | I | S | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | P | F | I | Q | I | T | G | L | G | G | S | A | L | V | G | R | D | L | S | F | K | L | . |
. |
. |
. |
. |
. |
. |
. |
M | K | I | G | Y | R | V | A | C | E | A | . |
. |
D | T | H | V | Q | A | T | V | S | Q | A | L | K | K |
Query Conservation |   |
  |   |
|   |   |   |   |   |   |
|   |   | . | . | . | . | . | . | . | . | . | . |
|   |   |
|   |
|   |
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |
| . | . | . | . | . | . | . | . |   |   |   |
|   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |
|   |   |   |
|
|   |
|   |   |   |
|   |
|
|
|   |   |   |   |
|
|   |
|
|
|
|
|
|   |
|
|
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|
|
|
|   |   |   |   |   |   |
|   |   |
|
|
|
Template Sequence |   |
R | R | I | R | V | F | S | E | K | V | R | S | G | E | I | R | G | H | T | G | K | K | L | V | N | V | I | S | I | G | I | G | G | S | Y | L | G | T | E | F | V | H | L | A | L | A | A | E | G | Y | A | A | E | K | A | H | G | R | Q | I | H | F | L | A | N | V | D | P | V | D | V | W | L | A | E | R | G | F | D | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T | S | S |
|
| T | T | S |
|
|
|
|  |  |  |  |  |
|
| G | G | G | T |  |  |  |  |  |  |  |  |  |  |  | T | S |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
|
| S | S |  |  |  |  |  |  |  |  | T | T |
|
| G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
125 | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . |
  |
  |   |
183 | . | |
. | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 210 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
| . |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |
|
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | D | . |
V | Q | I | A | I | S | Y | S | G | S | K | K | E | I | V | L | C | A | E | A | A | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | Q | G | A | T | V | I | A | I | T | S | L |
Query Conservation |   |
  |
| . |   |
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
| . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |
|   |
|
|   |   |
Alig confidence |   |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |
|
|
|
|
|
|
|
|
|   |
|
|   |   |
|   |   |   |   |
|   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |
|
|
|
|   |   |
Template Sequence |   |
E | E | T | L | V | V | V | I | S | K | T | F | T | T | A | E | T | M | M | N | A | R | S | V | R | D | W | Y | L | H | H | Y | K | G | D | E | R | A | L | G | A | H | F | C | A | V | S | T | N |
Template Known Secondary structure |   |
G | G |  |  |  |  |  |  |
| S | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
| G | G | G | S | G | G | G |  |  |  |  |
| S |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
205 | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|