Job Description P77245 Confidence 99.94% Date Thu Jan 5 12:26:46 GMT 2012 Rank 1 Aligned Residues 182 % Identity 19% Template c3shoA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, rpir family; PDBTitle: crystal structure of rpir transcription factor from sphaerobacter2 thermophilus (sugar isomerase domain) Resolution 1.80 Å

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		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		S	L	E	V	I	A	R	K	L	N	R	E	K	E	L	A	L	E	Q	T	C	A	L	L	D	Y	A	R	L	Q	K	I	I	E	V	I	S	K	A	P	F	I	Q	I	T	G	L	G	G	S	A	L	V	G	R	D	L	S	F	K	L	M	K	I	G	Y	R	V	A	C	E	.	A	D	T	H	V	Q	A	T
Query Conservation																																																																									.
Alig confidence																																						.																																			.
Template Conservation																																						.
Template Sequence		D	R	Q	Q	L	P	V	Q	V	F	T	N	D	I	E	N	L	N	Q	T	L	N	Q	T	Q	P	E	A	I	E	A	A	V	E	A	I	.	R	A	D	H	V	I	V	V	G	X	G	F	S	A	A	V	A	V	F	L	G	H	G	L	N	S	L	G	I	R	T	T	V	L	T	E	G	G	S	T	L	T	I
Template Known Secondary structure			G	G	G																			T														.			S								G	G	G														T	T										T
Template Predicted Secondary structure																																						.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	Q	A	L	K	K	G	D	V	Q	I	A	I	S	Y	S	G	S	K	K	E	I	V	L	C	A	E	A	A	R	K	Q	G	A	T	V	I	A	I	T	S	L	T	D	S	P	L	R	R	L	A	H	F	T	L	D	T	V	S	G	E	T	E	W	R	S	S	S	M	S	T	R	T	A	Q	N	S	V	T
Query Conservation
Alig confidence																																																																			.	.	.	.
Template Conservation																																																																			.	.	.	.
Template Sequence		T	L	A	N	L	R	P	T	D	L	X	I	G	V	S	V	W	R	Y	L	R	D	T	V	A	A	L	A	G	A	A	E	R	G	V	P	T	X	A	L	T	D	S	S	V	S	P	P	A	R	I	A	D	H	V	L	V	A	A	T	R	G	V	G	H	.	.	.	.	S	L	S	P	V	G	L	I	A	V	V
Template Known Secondary structure					T			T	T									S	S															T	T								S		T	T	S							S										S	S	S	.	.	.	.	S
Template Predicted Secondary structure																																																																			.	.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240					.	.	.	.	.	.	.	.	.	250	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	L	F	V	G	L	V	Q	L	N	D	V	E	S	L	K	M	I	Q	R	S	S	E	L	T	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	L	L	L	A	E	I	A	V	R	E	P	E	R	A	L	A	V	L	R	E	V	D	R	L	Y	R	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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