Job Description P77245 Confidence 93.90% Date Thu Jan 5 12:26:46 GMT 2012 Rank 131 Aligned Residues 136 % Identity 12% Template c3izbA_ PDB info PDB header:ribosome Chain: A: PDB Molecule:40s ribosomal protein rps0 (s2p); PDBTitle: localization of the small subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome Resolution NULL Å

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		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		L	E	Q	T	C	A	L	L	D	Y	A	R	L	Q	K	I	I	E	V	I	S	K	A	P	F	I	Q	I	T	G	L	G	G	.	S	A	L	V	G	R	D	L	S	F	K	L	M	K	I	G	Y	R	V	A	C	E	A	D	T	H	V	Q	A	T	V	S	Q	A	L	K	K	G	D	V	Q	I	A	I	S	Y
Query Conservation																																			.
Alig confidence										.	.																								.																											.
Template Conservation										.	.																																																			.
Template Sequence		V	G	K	T	W	E	K	L	.	.	V	L	A	A	R	I	I	A	A	I	P	N	P	E	D	V	V	A	I	S	S	R	T	F	G	Q	R	A	V	L	K	F	A	A	H	T	G	A	T	P	I	A	G	R	F	T	P	G	S	F	.	T	N	Y	I	T	R	S	F	K	E	P	R	L	V	I	V	T	D	P
Template Known Secondary structure										.	.												S	S									S	T	T	T												T						S	S			S	S	T	T	.	T	S	T	T	S	S		S	S			S					S		T
Template Predicted Secondary structure										.	.																																																			.
Template SS confidence
		50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	S	K	K	E	I	V	L	C	A	E	A	A	R	K	Q	G	A	T	V	I	A	I	T	S	L	T	D	S	P	L	R	R	L	A	H	F	T	L	D	T	V	S	G	E	T	E	W	R	S	S	S	M	S	T	R	T	A	Q	N	S	V	T	D	L	L	F	V	G	L	V	Q	L	N	D
Query Conservation
Alig confidence					.	.	.	.																									.	.											.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.																									.	.											.	.	.	.	.	.	.	.	.	.
Template Sequence		R	S	D	.	.	.	.	A	Q	A	I	K	E	A	S	Y	V	N	I	P	V	I	A	L	T	D	L	D	S	P	S	.	.	E	F	V	D	V	A	I	P	C	N	.	.	.	.	.	.	.	.	.	.	N	R	G	K	H	S	I	G	L	I	W	Y	L	L	A	R	E	V	L	R	L	R	G
Template Known Secondary structure		T	T	T	.	.	.	.											T									T	T	S		S	.	.	T	T		S							.	.	.	.	.	.	.	.	.	.	S	S	S	T																	T	T	S
Template Predicted Secondary structure					.	.	.	.																									.	.											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		127	.	.					130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.			.	.	.	.	.	.	160	.	.	.											.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions