Job Description P77245 Confidence 80.54% Date Thu Jan 5 12:26:46 GMT 2012 Rank 298 Aligned Residues 96 % Identity 19% Template c3ivpD_ PDB info PDB header:dna binding protein Chain: D: PDB Molecule:putative transposon-related dna-binding protein; PDBTitle: the structure of a possible transposon-related dna-binding protein2 from clostridium difficile 630. Resolution 2.02 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	N	V	S	E	L	Q	S	V	S	S	R	Q	M	A	K	Q	L	G	I	S	Q	S	S	I	V	K	F	A	Q	K	L	G	A	Q	G	F	T	E	L	R	M	A	L	I	G	E	Y	S	A	S	R	E	K	T	N	A	T	A	L	H	L	H	S	S	I	T	S	D	D	S	L	E	V	I	A	R	K	L
Query Conservation
Alig confidence																																												.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	K	E	A	R	K	K	Q	G	L	T	R	E	Q	V	G	A	X	I	E	I	D	P	R	Y	L	T	N	I	E	N	K	G	Q	H	P	S	L	Q	V	L	Y	.	D	L	V	S	L	L	N	V	S	V	D	E	F	F	L	P	A	S	S	Q	V	K	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									T	T											T	S											S											.							T			S					S		T	T	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																												.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.				.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.
Query SS confidence																						.	.	.
Query Sequence		N	R	E	K	E	L	A	L	E	Q	T	C	A	L	L	D	Y	A	R	L	.	.	.	Q	K	I	I	E	V	I	S	K	A	P	F	I
Query Conservation																						.	.	.
Alig confidence		.	.																			.	.	.
Template Conservation		.	.
Template Sequence		.	.	T	K	R	R	Q	L	E	N	K	I	D	N	F	T	D	A	D	L	V	I	X	E	S	V	A	D	G	I	V	K	S	K	E	V
Template Known Secondary structure		.	.										G	G	G																				T
Template Predicted Secondary structure		.	.
Template SS confidence
				82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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