Job Description P77245 Confidence 94.41% Date Thu Jan 5 12:26:46 GMT 2012 Rank 120 Aligned Residues 109 % Identity 12% Template c3ecoB_ PDB info PDB header:transcription Chain: B: PDB Molecule:mepr; PDBTitle: crystal structure of mepr, a transcription regulator of the2 staphylococcus aureus multidrug efflux pump mepa Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.			.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		Y	L	T	K	I	S	N	A	G	S	E	.	.	F	T	E	N	E	Q	K	I	A	D	F	L	Q	A	N	V	S	E	L	Q	S	V	S	S	R	Q	M	A	K	Q	L	G	I	S	Q	S	S	I	V	K	F	A	Q	K	L	G	A	Q	G	F	T	E	L	R	M	A	L	I	G	E	Y	S	A	S	R	E	K
Query Conservation													.	.
Alig confidence													.	.																		.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	K	Q	K	A	D	Q	K	L	E	Q	F	D	I	T	N	E	Q	G	H	T	L	G	Y	L	Y	A	H	Q	Q	.	.	D	G	L	T	Q	N	D	I	A	K	A	L	Q	R	T	G	P	T	V	S	N	L	L	R	N	L	E	R	K	K	L	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											G	G	G	T															S		T	.	.	T		B										T															T	T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	A	T	A	L	H	L	H	S	S	I	T	S	D	D	S	L	E	V	I	A	R	K	L	N	R	E	K	E	L	A	L	E	Q	T	C	A	L	L	D	Y	A	R	L	Q	K	I	I	E	V	I	S	K
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	Y	R	Y	V	K	N	I	G	L	T	T	S	G	I	K	L	V	E	A	F	T	S	I	F	D	E	M	E	Q	T	L	V	S	Q	L	S	E	E	E	N	E	Q	M	K	A	N	L	T	K
Template Known Secondary structure		.	.	.	.	.																				T													T	T	S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions