Job Description P77245 Confidence 94.99% Date Thu Jan 5 12:26:46 GMT 2012 Rank 97 Aligned Residues 107 % Identity 8% Template c3boqB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator, marr family; PDBTitle: crystal structure of marr family transcriptional regulator from2 silicibacter pomeroyi Resolution 2.39 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	T	K	I	S	N	A	G	S	E	F	T	E	N	E	Q	K	I	A	D	F	L	Q	A	N	V	S	E	L	Q	S	V	S	S	R	Q	M	A	K	Q	L	G	I	S	Q	S	S	I	V	K	F	A	Q	K	L	G	A	Q	G	F	T	E	L	R	M	A	L	I	G	E	Y	S	A	S	R	E	K	T	N
Query Conservation
Alig confidence											.																				.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.																				.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	N	R	Q	L	L	D	E	T	.	G	L	S	L	A	K	F	D	A	X	A	Q	L	A	R	N	P	D	G	.	.	.	L	S	X	G	K	L	S	G	A	L	K	V	T	N	G	N	V	S	G	L	V	N	R	L	I	K	D	G	X	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											.	S																T	T		.	.	.											S	S			S												T	T	S	B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.																				.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.				60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	A	L	H	L	H	S	S	I	T	S	D	D	S	L	E	V	I	A	R	K	L	N	R	E	K	E	L	A	L	E	Q	T	C	A	L	L	D	Y	A	R	L	Q	K	I	I	E	V	I	S	K
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	V	K	A	S	F	S	A	K	L	T	D	A	G	L	T	T	F	K	Q	A	S	E	A	H	N	R	I	L	A	E	L	L	R	A	V	S	D	Q	D	X	V	E	A	S	A	A	L	R	G
Template Known Secondary structure		.	.	.									B																							T	T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions