Job Description P77245 Confidence 90.14% Date Thu Jan 5 12:26:46 GMT 2012 Rank 195 Aligned Residues 69 % Identity 13% Template c3bbnB_ PDB info PDB header:ribosome Chain: B: PDB Molecule:ribosomal protein s2; PDBTitle: homology model for the spinach chloroplast 30s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome. Resolution 9.40 Å

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		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	Q	I	A	I	S	Y	S	G	S	K	K	E	I	V	L	C	A	E	A	A	R	K	Q	G	A	T	V	I	A	I	T	S	L	T	D	S	P	L	R	R	L	A	H	F	T	L	D	T	V	S	G	E	T	E	W	R	S	S	S	M	S	T	R	T	A	Q	N	S	V	T	D	L	L	F	V	G	L	V
Query Conservation
Alig confidence													.	.	.	.																									.	.											.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.																									.	.											.	.	.	.	.	.	.	.	.	.
Template Sequence		D	I	V	I	I	V	D	Q	Q	E	E	.	.	.	.	Y	T	A	L	R	E	C	I	T	L	G	I	P	T	I	C	L	I	D	T	N	C	N	P	.	.	D	L	A	D	I	S	I	P	A	N	.	.	.	.	.	.	.	.	.	.	D	D	A	I	A	S	I	R	L	I	L	T	K	L	V	F	A	I	C
Template Known Secondary structure		S					S		T	T	T	T	.	.	.	.									T	T	T									S	S	S			.	.	S	S		S							.	.	.	.	.	.	.	.	.	.	S	S	S
Template Predicted Secondary structure													.	.	.	.																									.	.											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.					.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.			.	.	200	.	.	.	.	.	.	.											.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		264	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	N	D	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	G	R	S	S
Template Known Secondary structure			T	S	S
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions