Job Description P77245 Confidence 99.76% Date Thu Jan 5 12:26:46 GMT 2012 Rank 14 Aligned Residues 160 % Identity 19% Template c2yvaB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:dnaa initiator-associating protein diaa; PDBTitle: crystal structure of escherichia coli diaa Resolution 1.85 Å

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		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.				.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.							.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.																																					.	.	.	.	.	.
Query SS confidence																											.	.	.																																					.	.	.	.	.	.
Query Sequence		L	E	V	I	A	R	K	L	N	R	E	K	E	L	A	L	E	Q	T	C	A	L	L	D	Y	.	.	.	A	R	L	Q	K	I	I	E	V	I	S	K	A	P	F	I	Q	I	T	G	L	G	G	S	A	L	V	G	R	D	L	S	F	K	L	M	.	.	.	.	.	.	K	I	G	Y	R	V	A	C	E	A
Query Conservation																											.	.	.																																					.	.	.	.	.	.
Alig confidence																											.	.	.																																					.	.	.	.	.	.
Template Conservation
Template Sequence		M	Q	E	R	I	K	A	C	F	T	E	S	I	Q	T	Q	I	A	A	A	E	A	L	P	D	A	I	S	R	A	A	M	T	L	V	Q	S	L	L	N	G	N	K	I	L	C	C	G	N	G	T	S	A	A	N	A	Q	H	F	A	A	S	M	I	N	R	F	E	T	E	R	P	S	L	P	A	I	A	L	N
Template Known Secondary structure																								S																	T	T								S	T															T		S	S	S										S	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		169	170	.	.	.	.	.	.	.																.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.				.	.	.	230
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.
Query Sequence		D	T	H	V	Q	A	T	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	L	K	K	G	D	V	Q	I	A	I	S	Y	S	G	S	K	K	E	I	V	L	C	A	E	A	A	R	K	Q	G	A	T	V	I	A	I	T	S	L	T	D	S	P	L	R	R	L	.	.	.	A	H	F	T
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.
Template Conservation
Template Sequence		T	D	N	V	V	L	T	A	I	A	N	D	R	L	H	D	E	V	Y	A	K	Q	V	R	A	L	G	H	A	G	D	V	L	L	A	I	S	T	R	G	N	S	R	D	I	V	K	A	V	E	A	A	V	T	R	D	M	T	I	V	A	L	T	G	Y	D	G	G	E	L	A	G	L	L	G	P	Q	D	V	E
Template Known Secondary structure											T	T	S	T	T	G	G	G	T	T										T	T								S	S	S															T	T									T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.			250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		L	D	T	V	S	G	E	T	E	W	R	S	S	S	M	S	T	R	T	.	.	A	Q	N	S	V	T	D	L	L	F	V	G	L	V	Q	L
Query Conservation																					.	.
Alig confidence								.	.	.	.	.	.	.	.						.	.
Template Conservation								.	.	.	.	.	.	.	.
Template Sequence		I	R	I	P	S	H	.	.	.	.	.	.	.	.	R	S	A	R	I	Q	E	M	H	M	L	T	V	N	C	L	C	D	L	I	D	N	T
Template Known Secondary structure					S		S	.	.	.	.	.	.	.	.
Template Predicted Secondary structure								.	.	.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.									.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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