Job Description P77245 Confidence 70.92% Date Thu Jan 5 12:26:46 GMT 2012 Rank 429 Aligned Residues 112 % Identity 17% Template c2qipA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:protein of unknown function vpa0982; PDBTitle: crystal structure of a protein of unknown function vpa0982 from vibrio2 parahaemolyticus rimd 2210633 Resolution 1.48 Å

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		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.														.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	D	Y	A	R	L	Q	K	I	I	E	V	I	S	K	A	P	F	I	Q	I	T	G	L	G	G	S	A	L	V	G	R	D	L	S	F	K	L	M	K	I	G	Y	R	V	A	C	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	D	T	H	V	Q	A	T	V	S	Q	A	L	K	K	G	D	V	Q
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	D	Y	N	Q	F	W	Y	V	A	T	Q	E	K	E	V	V	S	A	K	A	Y	A	I	A	S	N	D	P	K	Q	R	Q	F	H	H	I	L	R	G	V	G	F	E	V	X	L	K	P	Y	I	Q	R	R	D	G	S	A	K	G	D	W	D	V	G	I	T	L	D	A	I	E	I	A	P	D	V	D	R	V
Template Known Secondary structure		B										T	T	T																													T												S	S				S															G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.			.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																								.									.	.
Query SS confidence																								.									.	.
Query Sequence		I	A	I	S	Y	S	G	S	K	K	E	I	V	L	C	A	E	A	A	R	K	Q	.	G	A	T	V	I	A	I	T	.	.	S	L	T	D	S	P	L	R	R	L	A	H	F	T	L	D	T	V
Query Conservation																								.									.	.
Alig confidence									.	.	.													.									.	.
Template Conservation									.	.	.
Template Sequence		I	L	V	S	G	D	G	.	.	.	D	F	S	L	L	V	E	R	I	Q	Q	R	Y	N	K	K	V	T	V	Y	G	V	P	R	L	T	S	Q	T	L	I	D	C	A	D	N	F	V	A	I	D
Template Known Secondary structure								G	.	.	.	G	G																					G	G	G	S								S	S						S
Template Predicted Secondary structure									.	.	.
Template SS confidence
		110	.	.	.	.	.	.				.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions