Job Description P77245 Confidence 86.83% Date Thu Jan 5 12:26:46 GMT 2012 Rank 231 Aligned Residues 128 % Identity 17% Template c1kqgA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:formate dehydrogenase, nitrate-inducible, major subunit; PDBTitle: formate dehydrogenase n from e. coli Resolution 2.80 Å

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		122	.	.	.	.	.	.	.	130	.	.	.	.																			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.																					.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.																					.	.	.	.
Query Sequence		Y	A	R	L	Q	K	I	I	E	V	I	S	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	F	I	Q	I	T	G	L	G	G	S	A	L	V	G	R	D	L	S	F	K	L	M	.	K	I	G	Y	R	V	A	C	E	A	D	T	H	V	Q	A	T	V	S	Q	.	.	.	.
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.																					.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.																					.	.	.	.
Template Conservation
Template Sequence		E	E	A	F	S	R	I	A	K	L	M	K	A	D	R	D	A	N	F	I	E	K	N	E	Q	G	V	T	V	N	R	W	L	S	T	G	M	L	C	A	S	G	A	S	N	E	T	G	M	L	T	Q	K	F	A	R	S	L	G	M	L	A	V	D	N	Q	A	R	V	H	G	P	T	V	A	S	L	A	P	T
Template Known Secondary structure																									T	T	S						B		S							T	T	S															T	T	B						G	G	G
Template Predicted Secondary structure
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
													179	180	.	.	.	.	.	.	.	.	.	190				.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.													.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.													.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	A	L	K	K	G	D	V	Q	I	A	I	S	.	.	.	Y	S	G	S	K	K	E	I	V	L	C	A	E	A	A	R	K	Q	G	A	T	V	I	A	I	T	S	L	T	D	S	P	L	R	R	L	A	H	F	T	L	D	T	V	S	G	E	T	E	W	R	S	S	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.													.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.													.	.	.																										.																									.	.	.	.
Template Conservation																																																					.																									.	.	.	.
Template Sequence		F	G	R	G	A	M	T	N	H	W	V	D	I	K	N	A	N	V	V	M	V	M	G	G	N	A	A	E	A	H	P	V	G	F	R	W	A	M	E	A	K	N	N	N	D	A	T	L	I	V	V	.	D	P	R	F	T	R	T	A	S	V	A	D	I	Y	A	P	I	R	S	G	T	D	I	T	.	.	.	.
Template Known Secondary structure			S			S		S	S		T	G	G	G	G	G		S						S							S														S								.		S	S							T		S							T	T					.	.	.	.
Template Predicted Secondary structure																																																					.																									.	.	.	.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	T	R	T	A	Q	N	S	V	T	D	L	L	F
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	F	L	S	G	V	L	R	Y	L	I
Template Known Secondary structure		.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							283	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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