Return to main results Retrieve Phyre Job Id

Job DescriptionP23827
Confidence3.48%DateThu Jan 5 11:39:38 GMT 2012
Rank66Aligned Residues36
% Identity11%Templated2vnud1
SCOP infoOB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   99100.........110.........120.........130.........140
Predicted Secondary structure 
























Query SS confidence 









































Query Sequence  SPVSTMMACPDGKKEKKFVTAYLGDAGMLRYNSKLPIVVYTP
Query Conservation     

 


    
  


         











 
Alig confidence 





















.....









.



Template Conservation    

 
                .....  
 
 


 .
 
 
Template Sequence  QYVGQLAPSSVDPQSSSTQNVF. . . . . VILXDKCLPK. VRIR
Template Known Secondary structure 
GGG

TT

S
.....SSTTS

.
Template Predicted Secondary structure 












.....





.
Template SS confidence 









































   402.......410.........420... ......430... ....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions