Job Description P23827 Confidence 2.58% Date Thu Jan 5 11:39:38 GMT 2012 Rank 87 Aligned Residues 71 % Identity 17% Template c3d12E_ PDB info PDB header:hydrolase/membrane protein Chain: E: PDB Molecule:ephrin-b3; PDBTitle: crystal structures of nipah virus g attachment glycoprotein in complex2 with its receptor ephrin-b3 Resolution 3.00 Å

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.								.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure																																																		.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.
Query Sequence		T	P	Q	E	D	E	S	T	L	K	V	E	L	L	I	G	Q	T	L	E	V	D	C	N	L	H	R	L	G	G	K	L	E	N	K	T	L	E	G	W	G	Y	D	Y	Y	V	F	D	.	.	.	.	.	.	.	K	V	S	S	P	V	S	T	M	M	A	C	P	D	G	K	K	E	K	K	F	V	T	A	Y
Query Conservation																																																		.	.	.	.	.	.	.
Alig confidence																																								.	.									.	.	.	.	.	.	.
Template Conservation																																								.	.
Template Sequence		K	R	F	Q	A	E	G	G	Y	V	L	Y	P	Q	I	G	D	R	L	D	L	L	C	P	R	A	R	P	P	G	P	H	S	S	P	S	Y	E	.	.	F	Y	K	L	Y	L	V	E	G	A	Q	G	R	R	C	E	A	P	P	A	P	N	L	L	L	T	C	D	R	P	D	L	D	L	R	F	T	I	K	F
Template Known Secondary structure			S	T	T	S	S	S		S						T	T											S	S			T	T			S	S			.	.	B								S					T	T	B			S	S										S	S	S								S
Template Predicted Secondary structure																																								.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions