Return to main results Retrieve Phyre Job Id

Job DescriptionP23827
Confidence10.37%DateThu Jan 5 11:39:38 GMT 2012
Rank27Aligned Residues64
% Identity14%Templatec2dreA_
PDB info PDB header:plant proteinChain: A: PDB Molecule:water-soluble chlorophyll protein; PDBTitle: crystal structure of water-soluble chlorophyll protein from2 lepidium virginicum at 2.00 angstrom resolution
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   88.90.........100.. .... ...110..... ....120.........130.........140.........
Predicted Secondary structure 







..

......






..........














Query SS confidence 














. .



. . . . . .








. . . . . . . . . .

































Query Sequence  GYDYYVFDKVSSPVS. . TMMA. . . . . . CPDGKKEKK. . . . . . . . . . FVTAYLGDAGMLRYNSKLPIVVYTPDNVDVKYRV
Query Conservation 

 

 
       
..
 

......
    
  
..........

         











 
   





Alig confidence 














..



......








..........

































Template Conservation 
  


 

  
 


        
  


 


       
 

 
         

 
 
 
 
 
      
  

 
Template Sequence  ETRYFIQPASDNNGGGLVPANVDLSHLCPLGIVRTSLPYQPGLPVTISTPSSSEGNDVLTNTNIAITFDAPIWLCPSSKT
Template Known Secondary structure  T

SS
SSS


SSSS
SSS

SSTT





TT

SSSB
BTTS
B

S

SSSS
SB
Template Predicted Secondary structure 















































Template SS confidence 















































































   18.20.........30.........40.........50.........60.........70.........80.........90.......
 
   150.
Predicted Secondary structure 
Query SS confidence 

Query Sequence  WK
Query Conservation 
 
Alig confidence 

Template Conservation 
 
Template Sequence  WT
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 

   98.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions