Job Description P23827 Confidence 2.66% Date Thu Jan 5 11:39:38 GMT 2012 Rank 82 Aligned Residues 72 % Identity 15% Template c1jmoA_ PDB info PDB header:blood clotting Chain: A: PDB Molecule:heparin cofactor ii; PDBTitle: crystal structure of the heparin cofactor ii-s195a thrombin complex Resolution 2.20 Å

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		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	H	R	L	G	G	K	L	E	N	K	T	L	E	G	W	G	Y	D	Y	Y	V	F	D	K	V	S	S	P	V	S	T	M	M	A	C	P	D	G	K	K	E	K	K	F	V	T	A	Y	L	G	D	A	G	M	L	R	Y	N	S	K	L	P	I	V	V	Y	T	P	D	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	C	I	Y	F	K	G	S	W	V	N	K	F	P	V	E	M	T	H	N	H	N	F	R	L	N	E	R	E	V	V	K	V	S	M	M	Q	T	K	G	N	F	L	A	A	N	D	Q	E	L	D	C	D	I	L	Q	L	E	Y	V	G	G	I	S	M	L	I	V	V	P	H	K
Template Known Secondary structure										B	S	S				G	G	G									S	S	S																				T	T	T	T									T	T	T									S	S
Template Predicted Secondary structure
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions