Job Description P31680 Confidence 62.70% Date Thu Jan 5 11:48:37 GMT 2012 Rank 46 Aligned Residues 73 % Identity 12% Template d1vola2 SCOP info Cyclin-like Cyclin-like Transcription factor IIB (TFIIB), core domain Resolution 2.70

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		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.								.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.
Query Sequence		A	V	L	Y	V	I	A	E	E	L	G	I	S	R	A	Q	F	D	Q	F	L	R	M	M	Q	G	G	A	Q	F	G	G	G	Y	Q	Q	Q	T	G	G	G	N	W	Q	.	.	.	.	.	.	.	Q	A	Q	R	G	P	T	L	E	D	A	C	N	V	L	G	V	K	P	T	D	D	A	T	T	I	K	R	A
Query Conservation																																														.	.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.	.																		.	.	.	.
Template Conservation																																																																						.	.	.	.
Template Sequence		D	F	M	S	R	F	C	S	N	L	C	L	P	K	Q	V	Q	M	A	A	T	H	I	A	R	K	A	V	E	L	D	L	V	P	G	R	S	P	I	S	V	A	A	A	A	I	Y	M	A	S	Q	A	S	A	E	K	R	T	Q	K	E	I	G	D	I	A	G	V	.	.	.	.	A	D	V	T	I	R	Q	S
Template Known Secondary structure		G	T									T																			T	T		S	T	T																	T	S	S	S												T		.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280					.	.	.	.	.	.	.	.
		225	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	R	L	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		289	290	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions