Job Description P31680 Confidence 53.88% Date Thu Jan 5 11:48:37 GMT 2012 Rank 49 Aligned Residues 77 % Identity 12% Template d1vola1 SCOP info Cyclin-like Cyclin-like Transcription factor IIB (TFIIB), core domain Resolution 2.70

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		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.								.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.
Query Sequence		A	V	L	Y	V	I	A	E	E	L	G	I	S	R	A	Q	F	D	Q	F	L	R	M	M	Q	G	G	A	Q	F	G	G	G	Y	Q	Q	Q	T	G	G	G	N	W	Q	.	.	.	.	.	.	.	Q	A	Q	R	G	P	T	L	E	D	A	C	N	V	L	G	V	K	P	T	D	D	A	T	T	I	K	R	A
Query Conservation																																														.	.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.	.																				.	.	.	.
Template Conservation																																																																								.	.	.	.
Template Sequence		K	E	I	T	T	M	A	D	R	I	N	L	P	R	N	K	V	D	R	T	N	N	L	F	R	Q	A	Y	E	Q	K	S	L	K	G	R	A	N	D	A	I	A	S	A	C	L	Y	I	A	C	R	Q	E	G	V	P	R	T	F	K	E	I	C	A	V	S	R	I	S	K	.	.	.	.	K	E	I	G	R	C
Template Known Secondary structure											T	T																			T				T	T	S																	T	T										T	T	T		S			.	.	.	.
Template Predicted Secondary structure																																																																								.	.	.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.					.	190	.	.	.	.
		225	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	K	L	M	S	E	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	K	L	I	L	K	A	L
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		195	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions